RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SAMSN1Q9NSI8 373 aaKnown RBP18.79■□□□□ 0.6
NME3-204ENST00000563498 DONSONQ9NYP3 566 aa18.79■□□□□ 0.6
NME3-204ENST00000563498 ADAM22Q9P0K1 906 aa18.79■□□□□ 0.6
NME3-204ENST00000563498 SIGLEC16A6NMB1 481 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 CACNB4O00305 520 aaPredicted RBP18.78■□□□□ 0.6
NME3-204ENST00000563498 NUDT21O43809 227 aaKnown RBP18.78■□□□□ 0.6
NME3-204ENST00000563498 CREB3O43889 395 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 BUB1BO60566 1050 aaPredicted RBP18.78■□□□□ 0.6
NME3-204ENST00000563498 CALB1P05937 261 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 KELP23276 732 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 CD82P27701 267 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 HTR7P34969 479 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 CSNK1DP48730 415 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 ZNF143P52747 638 aaPredicted RBP18.78■□□□□ 0.6
NME3-204ENST00000563498 HLTFQ14527 1009 aaKnown RBP eCLIP18.78■□□□□ 0.6
NME3-204ENST00000563498 C14orf28Q4W4Y0 310 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 CT47A1Q5JQC4 288 aaPredicted RBP18.78■□□□□ 0.6
NME3-204ENST00000563498 KCTD16Q68DU8 428 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 TAF8Q7Z7C8 310 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 Q8N9G6 341 aaPredicted RBP18.78■□□□□ 0.6
NME3-204ENST00000563498 FAM46DQ8NEK8 389 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 OR1E3Q8WZA6 343 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 EXTL1Q92935 676 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 CLSTN2Q9H4D0 955 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 LRRC19Q9H756 370 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 FGF22Q9HCT0 170 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 IL17BQ9UHF5 180 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 FZD10Q9ULW2 581 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 HECTD1Q9ULT8 2610 aa18.78■□□□□ 0.6
NME3-204ENST00000563498 SPTA1P02549 2419 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 PRAMEF33A0A0G2JMD5 474 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 A0A1W2PQC6 194 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 TMEM202A6NGA9 273 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 TERTO14746 1132 aaKnown RBP18.77■□□□□ 0.6
NME3-204ENST00000563498 PRAMEF10O60809 474 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 ITGB6P18564 788 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 ITIH1P19827 911 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 SERPINA4P29622 427 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 NDST2P52849 883 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 POLR2FP61218 127 aaKnown RBP18.77■□□□□ 0.6
NME3-204ENST00000563498 SRSF6Q13247 344 aaKnown RBP18.77■□□□□ 0.6
NME3-204ENST00000563498 MANEAQ5SRI9 462 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 SCYL2Q6P3W7 929 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 ZSWIM9Q86XI8 627 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 DTX1Q86Y01 620 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 CAMK1DQ8IU85 385 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 SLITRK4Q8IW52 837 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 ZSCAN1Q8NBB4 408 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 PLA2G15Q8NCC3 412 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 FUBP1Q96AE4 644 aaKnown RBP18.77■□□□□ 0.6
NME3-204ENST00000563498 PCDHB18PQ96TA0 734 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 ATP13A3Q9H7F0 1226 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 LRIT1Q9P2V4 623 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 PCDHB11Q9Y5F2 797 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 PCDHGA4Q9Y5G9 962 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 RNF215Q9Y6U7 377 aa18.77■□□□□ 0.6
NME3-204ENST00000563498 BOD1L1Q8NFC6 3051 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 TCRBV5S1A1TA0A578 114 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 ANKRD62A6NC57 917 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 CYSRT1A8MQ03 144 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.76■□□□□ 0.59
NME3-204ENST00000563498 CCP110O43303 1012 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 PRAMEF11O60813 436 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 RECQL5O94762 991 aaPredicted RBP18.76■□□□□ 0.59
NME3-204ENST00000563498 TRIM23P36406 574 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 STAT1P42224 750 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 RALGDSQ12967 914 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 ARHGEF7Q14155 803 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 CLEC16AQ2KHT3 1053 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 ATG14Q6ZNE5 492 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 USP7Q93009 1102 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 ECHDC3Q96DC8 303 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 TAB2Q9NYJ8 693 aa18.76■□□□□ 0.59
NME3-204ENST00000563498 UBR5O95071 2799 aaPredicted RBP18.76■□□□□ 0.59
NME3-204ENST00000563498 ANKRD36A6QL64 1941 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 C9orf172C9J069 976 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 J3KR12 359 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 ETV5P41161 510 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 POLR2LP62875 67 aaKnown RBP18.75■□□□□ 0.59
NME3-204ENST00000563498 CLPPQ16740 277 aaPredicted RBP18.75■□□□□ 0.59
NME3-204ENST00000563498 TSR1Q2NL82 804 aaKnown RBP18.75■□□□□ 0.59
NME3-204ENST00000563498 AFMIDQ63HM1 303 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 SPECC1LQ69YQ0 1117 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 LIPIQ6XZB0 460 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 MON1BQ7L1V2 547 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 SRLQ86TD4 932 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 ZFAND4Q86XD8 727 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 CNPY3Q9BT09 278 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 TMEM168Q9H0V1 697 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 DPEP2Q9H4A9 486 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 NLRC4Q9NPP4 1024 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 MRPL40Q9NQ50 206 aaKnown RBP18.75■□□□□ 0.59
NME3-204ENST00000563498 FAM207AQ9NSI2 230 aaPredicted RBP18.75■□□□□ 0.59
NME3-204ENST00000563498 FOXJ2Q9P0K8 574 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 UNC13CQ8NB66 2214 aa18.75■□□□□ 0.59
NME3-204ENST00000563498 B4DGG1 531 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 PDE2AO00408 941 aaPredicted RBP18.74■□□□□ 0.59
NME3-204ENST00000563498 SUV39H1O43463 412 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 CPNE6O95741 557 aa18.74■□□□□ 0.59
NME3-204ENST00000563498 PRKCGP05129 697 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms