RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 TUFMP49411 452 aaKnown RBP11.69□□□□□ -0.54
PCAT1-202ENST00000561978 SERPINH1P50454 418 aaKnown RBP11.69□□□□□ -0.54
PCAT1-202ENST00000561978 KPNA2P52292 529 aaKnown RBP11.69□□□□□ -0.54
PCAT1-202ENST00000561978 HK2P52789 917 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 ITKQ08881 620 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 ASPHQ12797 758 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 SMAD4Q13485 552 aaKnown RBP11.69□□□□□ -0.54
PCAT1-202ENST00000561978 GRM3Q14832 879 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 SMAD1Q15797 465 aaKnown RBP11.69□□□□□ -0.54
PCAT1-202ENST00000561978 ATAT1Q5SQI0 421 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 WLSQ5T9L3 541 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 ESRP1Q6NXG1 681 aaKnown RBP11.69□□□□□ -0.54
PCAT1-202ENST00000561978 FBXL22Q6P050 247 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 KDELC1Q6UW63 502 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 TFAP2DQ7Z6R9 452 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 ALYREFQ86V81 257 aaKnown RBP11.69□□□□□ -0.54
PCAT1-202ENST00000561978 ZNF354CQ86Y25 554 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 MIB1Q86YT6 1006 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 GIPC2Q8TF65 315 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 HMCESQ96FZ2 354 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 ZNF778Q96MU6 729 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 ASB2Q96Q27 587 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 POMKQ9H5K3 350 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 ZNF395Q9H8N7 513 aaPredicted RBP11.69□□□□□ -0.54
PCAT1-202ENST00000561978 NT5MQ9NPB1 228 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 TREX1Q9NSU2 369 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 DNAJC28Q9NX36 388 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 MARCOQ9UEW3 520 aaPredicted RBP11.69□□□□□ -0.54
PCAT1-202ENST00000561978 ACOT9Q9Y305 439 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 NUMBLQ9Y6R0 609 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 DOCK4Q8N1I0 1966 aa11.69□□□□□ -0.54
PCAT1-202ENST00000561978 CAPN14A8MX76 684 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 GSC2O15499 205 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 ITM2AO43736 263 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 PEX14O75381 377 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 TBX18O95935 607 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 HNRNPA1P09651 372 aaKnown RBP eCLIP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 ALOX15P16050 662 aaPredicted RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 HOXA9P31269 272 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 CSRP3P50461 194 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 ITGA9Q13797 1035 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 AAK1Q2M2I8 961 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 HSF5Q4G112 596 aaPredicted RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 RAP1GAP2Q684P5 730 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 TMPRSS6Q8IU80 811 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 LMNTD2Q8IXW0 634 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 PLD6Q8N2A8 252 aaKnown RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 FAM13CQ8NE31 585 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 PDZD8Q8NEN9 1154 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 CFAP61Q8NHU2 1237 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 AGAP11Q8TF27 550 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 OVCA2Q8WZ82 227 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 SUSD6Q92537 303 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 MCUR1Q96AQ8 359 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 ZNF419Q96HQ0 510 aaPredicted RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 RPRD1AQ96P16 312 aaPredicted RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 CORO1BQ9BR76 489 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 TTLL2Q9BWV7 592 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 TASP1Q9H6P5 420 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 CAB39LQ9H9S4 337 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 ATP13A1Q9HD20 1204 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 CHCHD3Q9NX63 227 aaKnown RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 DNMT3BQ9UBC3 853 aaKnown RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 TAGLN3Q9UI15 199 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 SLC38A8A6NNN8 435 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 G3V2L1 256 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 GOLGA8TH3BQL2 631 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 TLR5O60602 858 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 XYLBO75191 536 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 CNTN5O94779 1100 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 SNUPNO95149 360 aaKnown RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 STMN1P16949 149 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 OR1E1P30953 314 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 EPHB3P54753 998 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 SLC12A2P55011 1212 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 RAB10P61026 200 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 SMAD2Q15796 467 aaKnown RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 CNGA3Q16281 694 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 TSNAXIP1Q2TAA8 658 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 PREPLQ4J6C6 727 aaPredicted RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 ALFQ53S48 1182 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 NEPROQ6NW34 567 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 BBS5Q8N3I7 341 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 C2CD4AQ8NCU7 369 aaPredicted RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 IGSF8Q969P0 613 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 ZNF599Q96NL3 588 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 ZNF358Q9NW07 568 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 OXSMQ9NWU1 459 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 NOP53Q9NZM5 478 aaKnown RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 DNMT3LQ9UJW3 386 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 MAFFQ9ULX9 164 aa11.68□□□□□ -0.54
PCAT1-202ENST00000561978 NYNRINQ9P2P1 1898 aaKnown RBP11.68□□□□□ -0.54
PCAT1-202ENST00000561978 GREB1Q4ZG55 1949 aa11.67□□□□□ -0.54
PCAT1-202ENST00000561978 A0A087X1B8 175 aa11.67□□□□□ -0.54
PCAT1-202ENST00000561978 F5H5T6 163 aa11.67□□□□□ -0.54
PCAT1-202ENST00000561978 SPECC1L-ADORA2AF8WAN1 911 aa11.67□□□□□ -0.54
PCAT1-202ENST00000561978 J3KR12 359 aa11.67□□□□□ -0.54
PCAT1-202ENST00000561978 NRG2O14511 850 aaPredicted RBP11.67□□□□□ -0.54
PCAT1-202ENST00000561978 LYPLA1O75608 230 aaPredicted RBP11.67□□□□□ -0.54
PCAT1-202ENST00000561978 HSPA4LO95757 839 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms