RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CPNE1Q99829 537 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 SEMA3CQ99985 751 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 POLR1EQ9GZS1 481 aaKnown RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 SMG9Q9H0W8 520 aaKnown RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 TTYH1Q9H313 450 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 C12orf65Q9H3J6 166 aaKnown RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ATXN3LQ9H3M9 355 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 RABEP2Q9H5N1 569 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 TASP1Q9H6P5 420 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 NOD2Q9HC29 1040 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 MLXIPLQ9NP71 852 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 KCNK9Q9NPC2 374 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 PPANQ9NQ55 473 aaKnown RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ENAMQ9NRM1 1142 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 SAMD15Q9P1V8 674 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 SLC17A7Q9P2U7 560 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 LHX3Q9UBR4 397 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 UBA2Q9UBT2 640 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 SLC2A6Q9UGQ3 507 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 SEPT3Q9UH03 358 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 INTS6Q9UL03 887 aaKnown RBP6.59□□□□□ -1.35
CAPN3-210ENST00000561817 CLEC4EQ9ULY5 219 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 CCL26Q9Y258 94 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 ZNF510Q9Y2H8 683 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 DYRK1BQ9Y463 629 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 PCDHB11Q9Y5F2 797 aa6.59□□□□□ -1.35
CAPN3-210ENST00000561817 EPOPA6NHQ4 379 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 TTC36A6NLP5 189 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 GOLGA8RI6L899 631 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 TM9SF1O15321 606 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 TSPAN6O43657 245 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 LDB2O43679 373 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF821O75541 412 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 KRT37O76014 449 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 KRT38O76015 456 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ZWINTO95229 277 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 PAPSS2O95340 614 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 PRAMEF12O95522 483 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 FGF19O95750 216 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 PENKP01210 267 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 CKMP06732 381 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 CELA2BP08218 269 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ITGA2BP08514 1039 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 F7P08709 466 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ALADP13716 330 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 FOSL2P15408 326 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ATF4P18848 351 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 WEE1P30291 646 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 CRHR1P34998 444 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ETFBP38117 255 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 GP5P40197 560 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 CSKP41240 450 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 SERPINH1P50454 418 aaKnown RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 LIMK2P53671 638 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 CSE1LP55060 971 aaKnown RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 NTHL1P78549 312 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 CDK18Q07002 472 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 POU4F2Q12837 409 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 USP4Q13107 963 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 CLN3Q13286 438 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 POU6F1Q14863 301 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 GRIN2CQ14957 1233 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 CCDC85BQ15834 202 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF77Q15935 545 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 PDK4Q16654 411 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ZSCAN26Q16670 478 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 INO80DQ53TQ3 878 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 HSP90AA5PQ58FG0 334 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 TSTD2Q5T7W7 516 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 GPR158Q5T848 1215 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 GRTP1Q5TC63 336 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 PDPK2PQ6A1A2 396 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 IL31Q6EBC2 164 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 KIAA0930Q6ICG6 404 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 CGB2Q6NT52 195 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 NCEH1Q6PIU2 408 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 C6orf89Q6UWU4 347 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF771Q7L3S4 317 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 KCNMB4Q86W47 210 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 RASSF3Q86WH2 238 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 CMTM8Q8IZV2 173 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 APCDD1Q8J025 514 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ELMOD1Q8N336 334 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 DCAF4L2Q8NA75 395 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 TDRD5Q8NAT2 981 aaKnown RBP6.58□□□□□ -1.36
CAPN3-210ENST00000561817 LEMD2Q8NC56 503 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ACVR1CQ8NER5 493 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 VN1R2Q8NFZ6 395 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 OR13J1Q8NGT2 312 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 FIBINQ8TAL6 211 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 MGARPQ8TDB4 240 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 TCP10LQ8TDR4 215 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ACMSDQ8TDX5 336 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 SH3RF2Q8TEC5 729 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 NSMCE1Q8WV22 266 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 MAGEB18Q96M61 343 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 ZSWIM3Q96MP5 696 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 NUDCD1Q96RS6 583 aa6.58□□□□□ -1.36
CAPN3-210ENST00000561817 RBBP8Q99708 897 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms