RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TNFRSF10CO14798 259 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 FGF10O15520 208 aaPredicted RBP11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 CREB3O43889 395 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 BUB1BO60566 1050 aaPredicted RBP11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 PCCBP05166 539 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 CALB1P05937 261 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 HOXC4P09017 264 aaPredicted RBP11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 SFTPCP11686 197 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 KELP23276 732 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 HTR7P34969 479 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 CSRP3P50461 194 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 NDST2P52849 883 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 KIAA1024LP59773 190 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 POLR2FP61218 127 aaKnown RBP11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 NFATC3Q12968 1075 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 TCEA2Q15560 299 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 C14orf28Q4W4Y0 310 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 CFAP58Q5T655 872 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 KCTD16Q68DU8 428 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 SPRED1Q7Z699 444 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 ZSWIM9Q86XI8 627 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 CAMK1DQ8IU85 385 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 FAM46DQ8NEK8 389 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 OR56A4Q8NGH8 313 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 FUBP1Q96AE4 644 aaKnown RBP11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 CMKLR1Q99788 373 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 FAM117AQ9C073 453 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 B3GNT4Q9C0J1 378 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 CLSTN2Q9H4D0 955 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 LRRC19Q9H756 370 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 STARD5Q9NSY2 213 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 TAB2Q9NYJ8 693 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 FZD10Q9ULW2 581 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 AHCTF1Q8WYP5 2266 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 SCN8AQ9UQD0 1980 aa11.9□□□□□ -0.5
CARMIL3-204ENST00000561354 UNC13CQ8NB66 2214 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 TMEM202A6NGA9 273 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 J3KR12 359 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 CCP110O43303 1012 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 NUDT21O43809 227 aaKnown RBP11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 PRAMEF11O60813 436 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 RECQL5O94762 991 aaPredicted RBP11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 KRT10P13645 584 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 ITGB6P18564 788 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 CD82P27701 267 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 TRIM23P36406 574 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 STAT1P42224 750 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 RALGDSQ12967 914 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 HLTFQ14527 1009 aaKnown RBP eCLIP11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 CLEC16AQ2KHT3 1053 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 MANEAQ5SRI9 462 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 CCDC183Q5T5S1 534 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 AFMIDQ63HM1 303 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 SCYL2Q6P3W7 929 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 PRICKLE2Q7Z3G6 844 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 TAF8Q7Z7C8 310 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 DTX1Q86Y01 620 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 SLITRK4Q8IW52 837 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 Q8N9G6 341 aaPredicted RBP11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 PLA2G15Q8NCC3 412 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 OR1E3Q8WZA6 343 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 EXTL1Q92935 676 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 ECHDC3Q96DC8 303 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 SEMA3CQ99985 751 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 ARHGAP9Q9BRR9 750 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 FGF22Q9HCT0 170 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 NLRC4Q9NPP4 1024 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 FAM207AQ9NSI2 230 aaPredicted RBP11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 WDR70Q9NW82 654 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 LRIT1Q9P2V4 623 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 PCDHB11Q9Y5F2 797 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 HEMK1Q9Y5R4 338 aaPredicted RBP11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 RNF215Q9Y6U7 377 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 MYO18BQ8IUG5 2567 aa11.89□□□□□ -0.51
CARMIL3-204ENST00000561354 PRAMEF33A0A0G2JMD5 474 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 A0A1W2PQC6 194 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 ANKRD62A6NC57 917 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 PDE2AO00408 941 aaPredicted RBP11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 EPHB6O15197 1021 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 ARHGAP6O43182 974 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 PRAMEF10O60809 474 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 ITIH1P19827 911 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 SERPINA4P29622 427 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 KLK7P49862 253 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 TPI1P60174 286 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 POLR2LP62875 67 aaKnown RBP11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 B4GALNT1Q00973 533 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 NSUN2Q08J23 767 aaKnown RBP eCLIP11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 SRSF6Q13247 344 aaKnown RBP11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 ARHGEF7Q14155 803 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 CLPPQ16740 277 aaPredicted RBP11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 TSR1Q2NL82 804 aaKnown RBP11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 PPP1R15BQ5SWA1 713 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 LIPIQ6XZB0 460 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 MON1BQ7L1V2 547 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 SRLQ86TD4 932 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 ZSCAN1Q8NBB4 408 aa11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 ANP32BQ92688 251 aaKnown RBP11.88□□□□□ -0.51
CARMIL3-204ENST00000561354 USP7Q93009 1102 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms