RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ZNF623O75123 536 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 ODC1P11926 461 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 BMP2P12643 396 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 NCAM1P13591 858 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 ENO3P13929 434 aaPredicted RBP14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 ERCC2P18074 760 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 CCNA2P20248 432 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 PSMB4P28070 264 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 THPOP40225 353 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 HCAR3P49019 387 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 PKNOX1P55347 436 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 BNIP3Q12983 259 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 LSM12Q3MHD2 195 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 FGD3Q5JSP0 725 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 GPR107Q5VW38 600 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 CTU1Q7Z7A3 348 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 ZNF567Q8N184 647 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 ZNF786Q8N393 782 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 SLC15A4Q8N697 577 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 CDKL2Q92772 493 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 ATP6V1E2Q96A05 226 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 MYLPFQ96A32 169 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 ACDQ96AP0 544 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 PBXIP1Q96AQ6 731 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 RHOBTB2Q9BYZ6 727 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 ARHGAP39Q9C0H5 1083 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 MAGEE1Q9HCI5 957 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 DDIT4Q9NX09 232 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 PADI3Q9ULW8 664 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 RAD54BQ9Y620 910 aa14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 TDRD15B5MCY1 1934 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-220ENST00000560998 ZNF839A8K0R7 811 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 TPP1O14773 563 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 SEPT4O43236 478 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 ADAMTS4O75173 837 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 CLPXO76031 633 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 ALDH1A2O94788 518 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 ALDOAP04075 364 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 POLR2EP19388 210 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 ARRB2P32121 409 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 CCT8P50990 548 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 FCGRTP55899 365 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 TPI1P60174 286 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 CAMK2BQ13554 666 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 TRIM25Q14258 630 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 PTK2BQ14289 1009 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 DSC3Q14574 896 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 ZNF846Q147U1 533 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 INTS11Q5TA45 600 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 LINC00299Q6ZSB3 139 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 ZBTB49Q6ZSB9 765 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 PDZD4Q76G19 769 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 TANKQ92844 425 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 ZNF347Q96SE7 839 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 CD320Q9NPF0 282 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 DAPK2Q9UIK4 370 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 CPQQ9Y646 472 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 COL4A4P53420 1690 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 TCRBV3S1A0A5B6 114 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 SLCO1B7G3V0H7 640 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 CFLARO15519 480 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 TOP3BO95985 862 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 BCL10O95999 233 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 POMCP01189 267 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 CYP11A1P05108 521 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 PRKCGP05129 697 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 MGAT1P26572 445 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 CRADDP78560 199 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 SREBF2Q12772 1141 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 TRIM32Q13049 653 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 ITGADQ13349 1161 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 PMS2P3Q13401 168 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 KCNJ8Q15842 424 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 MTX3Q5HYI7 312 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 FAM171BQ6P995 826 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 CD300LGQ6UXG3 332 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 ATG14Q6ZNE5 492 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 UNC5BQ8IZJ1 945 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 TTC30BQ8N4P2 665 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 ZNF781Q8N8C0 355 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 TDRD5Q8NAT2 981 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 ARNTL2Q8WYA1 636 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 LRTOMTQ8WZ04 291 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 USP13Q92995 863 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 TCF12Q99081 682 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 ACBD6Q9BR61 282 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 MID2Q9UJV3 735 aa14.03□□□□□ -0.16
RABGGTA-220ENST00000560998 FOXD2O60548 495 aaPredicted RBP14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 F9P00740 461 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 NELFEP18615 380 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 CD247P20963 164 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 MAP4P27816 1152 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 DPP6P42658 865 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 CXCR3P49682 368 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 SESN2P58004 480 aaPredicted RBP14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 NIPAL4Q0D2K0 466 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 IFRD2Q12894 506 aaPredicted RBP14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 TUBA3CQ13748 450 aa14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 INTS6LQ5JSJ4 861 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-220ENST00000560998 PPM1LQ5SGD2 360 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms