RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 FEM1CQ96JP0 617 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 ING2Q9H160 280 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 ACAD9Q9H845 621 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 PTGDR2Q9Y5Y4 395 aa16.57■□□□□ 0.24
TPM1-228ENST00000560975 A0A0J9YYE9 177 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 EEF2KO00418 725 aaKnown RBP16.56■□□□□ 0.24
TPM1-228ENST00000560975 PPEF2O14830 753 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 CYP2B6P20813 491 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 ATP5F1P24539 256 aaPredicted RBP16.56■□□□□ 0.24
TPM1-228ENST00000560975 HADHAP40939 763 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 IGBP1P78318 339 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 POU6F1Q14863 301 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 ZNF773Q6PK81 442 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 NLGN1Q8N2Q7 840 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 AFAP1L2Q8N4X5 818 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 DGCR6LQ9BY27 220 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 PIF1Q9H611 641 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 CMTM6Q9NX76 183 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 B3GNT3Q9Y2A9 372 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 AQP12BA6NM10 295 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 FAM72CH0Y354 149 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 ZBTB7AO95365 584 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 ALDOCP09972 364 aaKnown RBP16.56■□□□□ 0.24
TPM1-228ENST00000560975 MBL2P11226 248 aaPredicted RBP16.56■□□□□ 0.24
TPM1-228ENST00000560975 RBP5P82980 135 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 FAM72AQ5TYM5 149 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 FAM72DQ6L9T8 149 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 FAM72BQ86X60 149 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 AQP12AQ8IXF9 295 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 TRPV3Q8NET8 790 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 STON2Q8WXE9 905 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 SH3YL1Q96HL8 342 aaPredicted RBP16.56■□□□□ 0.24
TPM1-228ENST00000560975 MYRFLQ96LU7 910 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 C3orf30Q96M34 536 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 OLFM1Q99784 485 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 SIAEQ9HAT2 523 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 CDHR5Q9HBB8 845 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 POU2F3Q9UKI9 436 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 TMEM98Q9Y2Y6 226 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 SCN4AP35499 1836 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 NUP205Q92621 2012 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 XYLBO75191 536 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 RSL1D1O76021 490 aaKnown RBP16.56■□□□□ 0.24
TPM1-228ENST00000560975 CPNE6O95741 557 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 ATP6V0D1P61421 351 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 MBTD1Q05BQ5 628 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 AQP6Q13520 282 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 FRG1Q14331 258 aaKnown RBP16.56■□□□□ 0.24
TPM1-228ENST00000560975 LY6KQ17RY6 165 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 REPS2Q8NFH8 660 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 MRPL57Q9BQC6 102 aaKnown RBP16.56■□□□□ 0.24
TPM1-228ENST00000560975 MROQ9BYG7 248 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 CXCL16Q9H2A7 254 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 GTF2IRD1Q9UHL9 959 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 TNFSF13BQ9Y275 285 aa16.56■□□□□ 0.24
TPM1-228ENST00000560975 ZNF646O15015 1829 aaPredicted RBP16.55■□□□□ 0.24
TPM1-228ENST00000560975 ZFC3H1O60293 1989 aaKnown RBP16.55■□□□□ 0.24
TPM1-228ENST00000560975 CLDN25C9JDP6 229 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 SEC14L2O76054 403 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 SHMT2P34897 504 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 PCYT1AP49585 367 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 SLC12A2P55011 1212 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 OCA2Q04671 838 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 CARTPTQ16568 116 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 FUT11Q495W5 492 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 DEPDC1Q5TB30 811 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 DSG4Q86SJ6 1040 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 RAB2BQ8WUD1 216 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 ZNF347Q96SE7 839 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 TUBA1CQ9BQE3 449 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 SMARCAD1Q9H4L7 1026 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 PGAP2Q9UHJ9 254 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 TRAF6Q9Y4K3 522 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 RAD54BQ9Y620 910 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 A8MT66 165 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 ANGPT2O15123 496 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 ALBP02768 609 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 GFAPP14136 432 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 IL7RP16871 459 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 BDNFP23560 247 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 NPY2RP49146 381 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 APLP1P51693 650 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 PLA2G16P53816 162 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 POLD3Q15054 466 aaPredicted RBP16.55■□□□□ 0.24
TPM1-228ENST00000560975 BROXQ5VW32 411 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 XAF1Q6GPH4 301 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 COLGALT2Q8IYK4 626 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 SFRP1Q8N474 314 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 SMG8Q8ND04 991 aaKnown RBP16.55■□□□□ 0.24
TPM1-228ENST00000560975 DNAJB14Q8TBM8 379 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 KIF12Q96FN5 646 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 POLE4Q9NR33 117 aa16.55■□□□□ 0.24
TPM1-228ENST00000560975 MAGEB16A2A368 324 aa16.54■□□□□ 0.24
TPM1-228ENST00000560975 AURKAO14965 403 aa16.54■□□□□ 0.24
TPM1-228ENST00000560975 ERCC2P18074 760 aa16.54■□□□□ 0.24
TPM1-228ENST00000560975 CAPN3P20807 821 aa16.54■□□□□ 0.24
TPM1-228ENST00000560975 HMGCS2P54868 508 aa16.54■□□□□ 0.24
TPM1-228ENST00000560975 LAMC2Q13753 1193 aa16.54■□□□□ 0.24
TPM1-228ENST00000560975 ZNF846Q147U1 533 aa16.54■□□□□ 0.24
TPM1-228ENST00000560975 MAPK11Q15759 364 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms