RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 RCVRNP35243 200 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 PBX3P40426 434 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 SLC18A1P54219 525 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 LRRC63Q05C16 580 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 SCAPQ12770 1279 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 C5orf22Q49AR2 442 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 CAVIN4Q5BKX8 364 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 HERC4Q5GLZ8 1057 aaPredicted RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 TTC38Q5R3I4 469 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 BEND5Q7L4P6 421 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 TMPRSS6Q8IU80 811 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 TBC1D10CQ8IV04 446 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 LSMEM2Q8N112 164 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 TDRD5Q8NAT2 981 aaKnown RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 ACTRT2Q8TDY3 377 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 EGLN2Q96KS0 407 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 MRGPRX1Q96LB2 322 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 OSBPL8Q9BZF1 889 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 NAPBQ9H115 298 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 NELFAQ9H3P2 528 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 S100A14Q9HCY8 104 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 C6orf203Q9P0P8 240 aaPredicted RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 CRNNQ9UBG3 495 aaPredicted RBP6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 ATP8B3O60423 1300 aa6.8□□□□□ -1.32
TSPAN3-209ENST00000560715 CACNA1SQ13698 1873 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 NPIPB15A6NHN6 443 aaPredicted RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 KLRF2D3W0D1 207 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 WNT9AO14904 365 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 SYN3O14994 580 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 PRPSAP2O60256 369 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 SYNCRIPO60506 623 aaKnown RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 TM7SF2O76062 418 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 SPARCP09486 303 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 BMP2P12643 396 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 KRT4P19013 534 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 PRKACBP22694 351 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 KRT2P35908 639 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 HNMTP50135 292 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 CCNA1P78396 465 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 CD300CQ08708 224 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 LRRC36Q1X8D7 754 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 LPCAT4Q643R3 524 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 MIER3Q7Z3K6 550 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 NUDT13Q86X67 352 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ICA1LQ8NDH6 482 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 OR56A3Q8NH54 315 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 GDPD5Q8WTR4 605 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 VWCEQ96DN2 955 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 PLEKHA8Q96JA3 519 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 WDFY2Q96P53 400 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 COLEC11Q9BWP8 271 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 KLC2Q9H0B6 622 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ERVK-5Q9HDB9 667 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 NCKIPSDQ9NZQ3 722 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 PCYOX1Q9UHG3 505 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 SLC30A1Q9Y6M5 507 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 MYH4Q9Y623 1939 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 A0A0A6YYK5 440 aaPredicted RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 LRRC72A6NJI9 287 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 SCAMP1O15126 338 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 KLK10O43240 276 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 PRDM1O75626 825 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 SULT1C4O75897 302 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 NOL4O94818 638 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ESRRBO95718 433 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 PTBP3O95758 552 aaKnown RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 CLEC3BP05452 202 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 PON1P27169 355 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 GDI1P31150 447 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 CHRNA3P32297 505 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 IDUAP35475 653 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 LONP1P36776 959 aaKnown RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 KCNJ1P48048 391 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 NCKAP1LP55160 1127 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 NPEPPSP55786 919 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 RPS8P62241 208 aaKnown RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 TNP2Q05952 138 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 CTBP1Q13363 440 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 SF3B4Q15427 424 aaKnown RBP eCLIP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 IL17AQ16552 155 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ARHGAP44Q17R89 818 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ATPAF1Q5TC12 328 aaPredicted RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 FAXCQ5TGI0 409 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 FAM91A1Q658Y4 838 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 PRPF39Q86UA1 669 aaKnown RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 GATAD2AQ86YP4 633 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 CPSF7Q8N684 471 aaKnown RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 DNAJB8Q8NHS0 232 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ST7LQ8TDW4 575 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 CLPTM1LQ96KA5 538 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 TTC25Q96NG3 672 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 CITED2Q99967 270 aaPredicted RBP6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ZFYVE21Q9BQ24 234 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 Q9H521 79 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 PALMDQ9NP74 551 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 FKBP14Q9NWM8 211 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ANKFY1Q9P2R3 1169 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 HEY2Q9UBP5 337 aa6.79□□□□□ -1.32
TSPAN3-209ENST00000560715 ZMAT5Q9UDW3 170 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms