RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 LGALS3BPQ08380 585 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 USP4Q13107 963 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 ZACNQ401N2 412 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 KLHL24Q6TFL4 600 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 GORASP1Q9BQQ3 440 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 TMEM138Q9NPI0 162 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 WNT10BO00744 389 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 RFXANKO14593 260 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 SLC22A3O75751 556 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 HNMTP50135 292 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 CXXC5Q7LFL8 322 aaKnown RBP12.7□□□□□ -0.38
SYNM-203ENST00000560674 CACUL1Q86Y37 369 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 COLGALT2Q8IYK4 626 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 LRRN4Q8WUT4 740 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 SUSD6Q92537 303 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 DGCR14Q96DF8 476 aaKnown RBP12.7□□□□□ -0.38
SYNM-203ENST00000560674 QKIQ96PU8 341 aaKnown RBP eCLIP12.7□□□□□ -0.38
SYNM-203ENST00000560674 OR52E6Q96RD3 313 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 NPAS2Q99743 824 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 TRIT1Q9H3H1 467 aaKnown RBP12.7□□□□□ -0.38
SYNM-203ENST00000560674 COQ6Q9Y2Z9 468 aa12.7□□□□□ -0.38
SYNM-203ENST00000560674 QSOX1O00391 747 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 CDH3P22223 829 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 C9orf131Q5VYM1 1079 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 GPR156Q8NFN8 814 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 CXorf40AQ8TE69 158 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 HOPXQ9BPY8 73 aaPredicted RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 PSMD13Q9UNM6 376 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 G3V2T6 193 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 ABLIM1O14639 778 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 ALOX5P09917 674 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 HOXB6P17509 224 aaKnown RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 MATKP42679 507 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 MARSP56192 900 aaKnown RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 FKBP1AP62942 108 aaKnown RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 DDR1Q08345 913 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 CAPSQ13938 189 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 POTEHQ6S545 545 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 AGMOQ6ZNB7 445 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 R3HCC1LQ7Z5L2 792 aaKnown RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 CHPFQ8IZ52 775 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 RASGEF1CQ8N431 466 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 OR5B17Q8NGF7 314 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 GIPC3Q8TF64 312 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 FNDC11Q9BVV2 318 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 TRIM39Q9HCM9 518 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 ADAMTS13Q76LX8 1427 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 PAPSS1O43252 624 aaPredicted RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 TGDSO95455 350 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 PTPRAP18433 802 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 LPOP22079 712 aaPredicted RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 ACLYP53396 1101 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 MTX3Q5HYI7 312 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 TRIM40Q6P9F5 258 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 ZFPM1Q8IX07 1006 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 TBC1D21Q8IYX1 336 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 ADCY4Q8NFM4 1077 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 OR4L1Q8NH43 312 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 SOCS4Q8WXH5 440 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 ALG3Q92685 438 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 BORCS5Q969J3 196 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 RSPH9Q9H1X1 276 aaPredicted RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 S100A14Q9HCY8 104 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 TRMT13Q9NUP7 481 aaKnown RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 REXO2Q9Y3B8 237 aaKnown RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 NRCAMQ92823 1304 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 BTN3A3O00478 584 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 PRKAR1AP10644 381 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 BMP7P18075 431 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 ANXA8L1Q5VT79 327 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 CMC1Q7Z7K0 106 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 CUZD1Q86UP6 607 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 FAM47BQ8NA70 645 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 TEX47Q8TBZ9 253 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 LINGO1Q96FE5 620 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 TRMOQ9BU70 441 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 RAPGEFL1Q9UHV5 662 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 WWP2O00308 870 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 GSC2O15499 205 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 SUV39H1O43463 412 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 PQBP1O60828 265 aaKnown RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 SERPINA1P01009 418 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 AMHP03971 560 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 PPIBP23284 216 aaKnown RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 AHCYL2Q96HN2 611 aaKnown RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 SLC9A7Q96T83 725 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 PDCD10Q9BUL8 212 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 TRAF6Q9Y4K3 522 aa12.69□□□□□ -0.38
SYNM-203ENST00000560674 POLR3HQ9Y535 204 aaPredicted RBP12.69□□□□□ -0.38
SYNM-203ENST00000560674 CCDC162PA2VCL2 907 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 LRRC14BA6NHZ5 514 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 NRP2O60462 931 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 CHRNGP07510 517 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 CAPGP40121 348 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 MED22Q15528 200 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 DACT2Q5SW24 774 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 SWT1Q5T5J6 900 aaKnown RBP12.68□□□□□ -0.38
SYNM-203ENST00000560674 LRRC4CQ9HCJ2 640 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 VWA7Q9Y334 891 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 HBS1LQ9Y450 684 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms