RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 ATP8A1Q9Y2Q0 1164 aa12.13□□□□□ -0.47
MARK3-221ENST00000560603 FHOD1Q9Y613 1164 aa12.13□□□□□ -0.47
MARK3-221ENST00000560603 SCN8AQ9UQD0 1980 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 BSNQ9UPA5 3926 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 TEX15Q9BXT5 2789 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 C2CD4BA6NLJ0 364 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 B4DGG1 531 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.12□□□□□ -0.47
MARK3-221ENST00000560603 RASA4BC9J798 803 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 STMND1H3BQB6 276 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 INSIG1O15503 277 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 RASA4O43374 803 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 PIGNO95427 931 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 CPNE6O95741 557 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 NTRK1P04629 796 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 HOXC4P09017 264 aaPredicted RBP12.12□□□□□ -0.47
MARK3-221ENST00000560603 KRT3P12035 628 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 UCHL3P15374 230 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 MMP8P22894 467 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 MMP12P39900 470 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 ETV5P41161 510 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 BIRC2Q13490 618 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 SERINC3Q13530 473 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 HLTFQ14527 1009 aaKnown RBP eCLIP12.12□□□□□ -0.47
MARK3-221ENST00000560603 COLEC12Q5KU26 742 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 SPECC1LQ69YQ0 1117 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 TRIM72Q6ZMU5 477 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 SLITRK4Q8IW52 837 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 PAF1Q8N7H5 531 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 CCDC112Q8NEF3 446 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 GPT2Q8TD30 523 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 OR1E3Q8WZA6 343 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 CENPIQ92674 756 aaPredicted RBP12.12□□□□□ -0.47
MARK3-221ENST00000560603 TUBGCP5Q96RT8 1024 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 ATP13A3Q9H7F0 1226 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 FOXJ2Q9P0K8 574 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 LHX3Q9UBR4 397 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 NEU3Q9UQ49 428 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 NOTCH2Q04721 2471 aa12.12□□□□□ -0.47
MARK3-221ENST00000560603 RP1L1Q8IWN7 2480 aaPredicted RBP12.12□□□□□ -0.47
MARK3-221ENST00000560603 USP9YO00507 2555 aaPredicted RBP12.11□□□□□ -0.47
MARK3-221ENST00000560603 ANKRD62A6NC57 917 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 RHPN2P1A8MT19 583 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 C9orf172C9J069 976 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 F8VZ95 297 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 AGRPO00253 132 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 HGSO14964 777 aaPredicted RBP12.11□□□□□ -0.47
MARK3-221ENST00000560603 FGF10O15520 208 aaPredicted RBP12.11□□□□□ -0.47
MARK3-221ENST00000560603 DESP17661 470 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 SERPINA4P29622 427 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 HDAC4P56524 1084 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 POLR2LP62875 67 aaKnown RBP12.11□□□□□ -0.47
MARK3-221ENST00000560603 CDR2Q01850 454 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 TLE1Q04724 770 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 SRSF1Q07955 248 aaKnown RBP eCLIP12.11□□□□□ -0.47
MARK3-221ENST00000560603 PEX6Q13608 980 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 CYTH1Q15438 398 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 RAB6CQ53S08 254 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 BORAQ6PGQ7 559 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 CCDC185Q8N715 623 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 EXOC2Q96KP1 924 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 C11orf70Q9BRQ4 267 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 SELENOOQ9BVL4 669 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 NAA15Q9BXJ9 866 aaKnown RBP12.11□□□□□ -0.47
MARK3-221ENST00000560603 RAB6CQ9H0N0 254 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 NOL6Q9H6R4 1146 aaKnown RBP12.11□□□□□ -0.47
MARK3-221ENST00000560603 WDR26Q9H7D7 661 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 CYP4F12Q9HCS2 524 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 FGF22Q9HCT0 170 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 MOSPD1Q9UJG1 213 aa12.11□□□□□ -0.47
MARK3-221ENST00000560603 ARHGEF17Q96PE2 2063 aaPredicted RBP12.1□□□□□ -0.47
MARK3-221ENST00000560603 TMEM202A6NGA9 273 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 WASH4PA8MWX3 477 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 GADD45BO75293 160 aaPredicted RBP12.1□□□□□ -0.47
MARK3-221ENST00000560603 RECQL5O94762 991 aaPredicted RBP12.1□□□□□ -0.47
MARK3-221ENST00000560603 CYP1A1P04798 512 aaPredicted RBP12.1□□□□□ -0.47
MARK3-221ENST00000560603 ELFN1P0C7U0 828 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 GPD1P21695 349 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 HTR7P34969 479 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 STAT1P42224 750 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 CSNK1DP48730 415 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 AIF1P55008 147 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 CYP4F2P78329 520 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 TRA2AQ13595 282 aaKnown RBP eCLIP12.1□□□□□ -0.47
MARK3-221ENST00000560603 AMZ1Q400G9 498 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 MIIPQ5JXC2 388 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 DPY19L2P1Q6NXN4 242 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 SCYL2Q6P3W7 929 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 PHLDB2Q86SQ0 1253 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 UMODL1-AS1Q8N2C9 162 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 IL22RA1Q8N6P7 574 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 NETO2Q8NC67 525 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 JOSD2Q8TAC2 188 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 ZNF564Q8TBZ8 553 aaPredicted RBP12.1□□□□□ -0.47
MARK3-221ENST00000560603 GPBAR1Q8TDU6 330 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 FUBP1Q96AE4 644 aaKnown RBP12.1□□□□□ -0.47
MARK3-221ENST00000560603 CATSPER2Q96P56 530 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 TAAR9Q96RI9 348 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 FUCA2Q9BTY2 467 aa12.1□□□□□ -0.47
MARK3-221ENST00000560603 MAGEB5Q9BZ81 275 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms