RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 A0A0J9YYE9 177 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 TTC34A8MYJ7 566 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 PRRT4C9JH25 899 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 H3BQF6 201 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 SLC7A4O43246 635 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 KRT37O76014 449 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 KRT38O76015 456 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 TRBC1P01850 177 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 LPOP22079 712 aaPredicted RBP8.65□□□□□ -1.02
TRAF3-209ENST00000560463 OAS2P29728 719 aaKnown RBP8.65□□□□□ -1.02
TRAF3-209ENST00000560463 HADHAP40939 763 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 PFKPQ01813 784 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 QPCTQ16769 361 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 UGP2Q16851 508 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 AAK1Q2M2I8 961 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 HNRNPA1L2Q32P51 320 aaKnown RBP8.65□□□□□ -1.02
TRAF3-209ENST00000560463 FNDC3BQ53EP0 1204 aaKnown RBP8.65□□□□□ -1.02
TRAF3-209ENST00000560463 TTMPQ5BVD1 217 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 BRAT1Q6PJG6 821 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 Q6ZVU0 165 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 Q7L0L9 218 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 CNTN4Q8IWV2 1026 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 DEFB123Q8N688 67 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 ARFGAP2Q8N6H7 521 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 PPM1NQ8N819 430 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 TMIEQ8NEW7 156 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 LPCAT1Q8NF37 534 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 ST13P5Q8NFI4 369 aaPredicted RBP8.65□□□□□ -1.02
TRAF3-209ENST00000560463 BLOC1S5Q8TDH9 187 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 KCNV2Q8TDN2 545 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 DCAKDQ8WVC6 231 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 PIH1D2Q8WWB5 315 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 SCG3Q8WXD2 468 aaKnown RBP8.65□□□□□ -1.02
TRAF3-209ENST00000560463 ARL8AQ96BM9 186 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 TLCD1Q96CP7 247 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 MTBPQ96DY7 904 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 CHFRQ96EP1 664 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 LYSMD1Q96S90 227 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 CPNE1Q99829 537 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 P2RY13Q9BPV8 354 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 TMEM245Q9H330 911 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 ZDHHC6Q9H6R6 413 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 PPANQ9NQ55 473 aaKnown RBP8.65□□□□□ -1.02
TRAF3-209ENST00000560463 C20orf96Q9NUD7 363 aaPredicted RBP8.65□□□□□ -1.02
TRAF3-209ENST00000560463 BCCIPQ9P287 314 aaKnown RBP eCLIP8.65□□□□□ -1.02
TRAF3-209ENST00000560463 TXNDC16Q9P2K2 825 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 THAP10Q9P2Z0 257 aaPredicted RBP8.65□□□□□ -1.02
TRAF3-209ENST00000560463 IL36AQ9UHA7 158 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 WASF2Q9Y6W5 498 aa8.65□□□□□ -1.02
TRAF3-209ENST00000560463 PCM1Q15154 2024 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 TSPAN11A1L157 253 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 SMIM23A6NLE4 172 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 CXorf49A8MYA2 514 aaPredicted RBP8.64□□□□□ -1.03
TRAF3-209ENST00000560463 SPECC1L-ADORA2AF8WAN1 911 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 SIN3BO75182 1162 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 FAM155BO75949 473 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 VAPBO95292 243 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 PIGNO95427 931 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 PRNPP04156 253 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 SNRPAP09012 282 aaKnown RBP8.64□□□□□ -1.03
TRAF3-209ENST00000560463 DRD1P21728 446 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 SP100P23497 879 aaPredicted RBP8.64□□□□□ -1.03
TRAF3-209ENST00000560463 SPRP35270 261 aaPredicted RBP8.64□□□□□ -1.03
TRAF3-209ENST00000560463 HMGCLP35914 325 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 SLCO1A2P46721 670 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 ARCN1P48444 511 aaKnown RBP8.64□□□□□ -1.03
TRAF3-209ENST00000560463 GALK1P51570 392 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 PTPN5P54829 565 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 CSE1LP55060 971 aaKnown RBP8.64□□□□□ -1.03
TRAF3-209ENST00000560463 PRAMEP78395 509 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 DNAJC3Q13217 504 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 THOC5Q13769 683 aaKnown RBP8.64□□□□□ -1.03
TRAF3-209ENST00000560463 ENPP2Q13822 863 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 ZNF234Q14588 700 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 TMED2Q15363 201 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 CNGA3Q16281 694 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 HSP90AA5PQ58FG0 334 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 TEDDM1Q5T9Z0 273 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 GRTP1Q5TC63 336 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 EMC10Q5UCC4 262 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 PTCRAQ6ISU1 281 aaPredicted RBP8.64□□□□□ -1.03
TRAF3-209ENST00000560463 ESRP1Q6NXG1 681 aaKnown RBP8.64□□□□□ -1.03
TRAF3-209ENST00000560463 TRMT10BQ6PF06 316 aaKnown RBP8.64□□□□□ -1.03
TRAF3-209ENST00000560463 CES3Q6UWW8 571 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 SERPINA13PQ6UXR4 307 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 KIAA0408Q6ZU52 694 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 TPRG1Q6ZUI0 275 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 USP45Q70EL2 814 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 TRMT11Q7Z4G4 463 aaKnown RBP8.64□□□□□ -1.03
TRAF3-209ENST00000560463 GALNT7Q86SF2 657 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 DSG4Q86SJ6 1040 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 RASSF3Q86WH2 238 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 RAVER1Q8IY67 606 aaKnown RBP8.64□□□□□ -1.03
TRAF3-209ENST00000560463 SLC44A3Q8N4M1 653 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 PAF1Q8N7H5 531 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 MDGA1Q8NFP4 955 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 OR13J1Q8NGT2 312 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 OR6K2Q8NGY2 324 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 TTC8Q8TAM2 541 aa8.64□□□□□ -1.03
TRAF3-209ENST00000560463 SORCS1Q8WY21 1168 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms