RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 ERGIC1Q969X5 290 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 ZNF653Q96CK0 615 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 EID2BQ96D98 161 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 ZDHHC18Q9NUE0 388 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 HDAC6Q9UBN7 1215 aa2.6□□□□□ -1.99
SPG11-222ENST00000560435 KLF2Q9Y5W3 355 aaPredicted RBP2.6□□□□□ -1.99
SPG11-222ENST00000560435 ANO9A1A5B4 782 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 MEIOCA2RUB1 952 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 SRSF10O75494 262 aaKnown RBP2.59□□□□□ -1.99
SPG11-222ENST00000560435 ACTL6BO94805 426 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 ITGA2BP08514 1039 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 SRD5A1P18405 259 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 CHATP28329 748 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 KRTAP10-1P60331 282 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 SEC61BP60468 96 aaKnown RBP2.59□□□□□ -1.99
SPG11-222ENST00000560435 MRPS5P82675 430 aaKnown RBP2.59□□□□□ -1.99
SPG11-222ENST00000560435 TBL3Q12788 808 aaKnown RBP2.59□□□□□ -1.99
SPG11-222ENST00000560435 SAFBQ15424 915 aaKnown RBP eCLIP2.59□□□□□ -1.99
SPG11-222ENST00000560435 STXBP5Q5T5C0 1151 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 HERC6Q8IVU3 1022 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 CHERPQ8IWX8 916 aaKnown RBP2.59□□□□□ -1.99
SPG11-222ENST00000560435 C1orf87Q8N0U7 546 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 GHDCQ8N2G8 530 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 FSIP1Q8NA03 581 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 FGFBP3Q8TAT2 258 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 TM9SF4Q92544 642 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 ABTB1Q969K4 478 aaPredicted RBP2.59□□□□□ -1.99
SPG11-222ENST00000560435 TAAR8Q969N4 342 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 ZNF354BQ96LW1 612 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 SARGQ9BW04 601 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 KATNAL1Q9BW62 490 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 PRDM8Q9NQV8 689 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 ENTPD7Q9NQZ7 604 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 CHST12Q9NRB3 414 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 FAM120CQ9NX05 1096 aaKnown RBP2.59□□□□□ -1.99
SPG11-222ENST00000560435 CNPY2Q9Y2B0 182 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 AMDHD2Q9Y303 409 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 PCDHGB5Q9Y5G0 923 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 ADAMTS9Q9P2N4 1935 aa2.59□□□□□ -1.99
SPG11-222ENST00000560435 TAF1P21675 1872 aa2.58□□□□□ -2
SPG11-222ENST00000560435 PSMD14O00487 310 aa2.58□□□□□ -2
SPG11-222ENST00000560435 ATP2C2O75185 946 aa2.58□□□□□ -2
SPG11-222ENST00000560435 PRSS56P0CW18 603 aa2.58□□□□□ -2
SPG11-222ENST00000560435 GNB3P16520 340 aa2.58□□□□□ -2
SPG11-222ENST00000560435 ZNF26P17031 533 aaPredicted RBP2.58□□□□□ -2
SPG11-222ENST00000560435 CD58P19256 250 aa2.58□□□□□ -2
SPG11-222ENST00000560435 ITGAXP20702 1163 aa2.58□□□□□ -2
SPG11-222ENST00000560435 S1PR1P21453 382 aa2.58□□□□□ -2
SPG11-222ENST00000560435 TERF1P54274 439 aa2.58□□□□□ -2
SPG11-222ENST00000560435 AP2B1P63010 937 aa2.58□□□□□ -2
SPG11-222ENST00000560435 GAGE5Q13069 117 aa2.58□□□□□ -2
SPG11-222ENST00000560435 GAGE6Q13070 117 aa2.58□□□□□ -2
SPG11-222ENST00000560435 PTK2BQ14289 1009 aa2.58□□□□□ -2
SPG11-222ENST00000560435 SPARCL1Q14515 664 aa2.58□□□□□ -2
SPG11-222ENST00000560435 ARHGEF6Q15052 776 aa2.58□□□□□ -2
SPG11-222ENST00000560435 SOWAHAQ2M3V2 549 aa2.58□□□□□ -2
SPG11-222ENST00000560435 ESCO2Q56NI9 601 aa2.58□□□□□ -2
SPG11-222ENST00000560435 ATF7IPQ6VMQ6 1270 aa2.58□□□□□ -2
SPG11-222ENST00000560435 PPM1EQ8WY54 764 aa2.58□□□□□ -2
SPG11-222ENST00000560435 C3orf49Q96BT1 292 aa2.58□□□□□ -2
SPG11-222ENST00000560435 ST6GAL2Q96JF0 529 aa2.58□□□□□ -2
SPG11-222ENST00000560435 RBM4BQ9BQ04 359 aaKnown RBP2.58□□□□□ -2
SPG11-222ENST00000560435 KXD1Q9BQD3 176 aa2.58□□□□□ -2
SPG11-222ENST00000560435 SLC52A3Q9NQ40 469 aa2.58□□□□□ -2
SPG11-222ENST00000560435 PADI1Q9ULC6 663 aa2.58□□□□□ -2
SPG11-222ENST00000560435 TYW5A2RUC4 315 aaKnown RBP2.57□□□□□ -2
SPG11-222ENST00000560435 GOLGA6L3A6NEY3 463 aa2.57□□□□□ -2
SPG11-222ENST00000560435 APAF1O14727 1248 aa2.57□□□□□ -2
SPG11-222ENST00000560435 TCERG1O14776 1098 aaKnown RBP2.57□□□□□ -2
SPG11-222ENST00000560435 ZNF821O75541 412 aaPredicted RBP2.57□□□□□ -2
SPG11-222ENST00000560435 SORBS2O94875 1100 aaKnown RBP2.57□□□□□ -2
SPG11-222ENST00000560435 MYL3P08590 195 aa2.57□□□□□ -2
SPG11-222ENST00000560435 DNAH10OSP0CZ25 163 aa2.57□□□□□ -2
SPG11-222ENST00000560435 ERVK-10P10266 1014 aa2.57□□□□□ -2
SPG11-222ENST00000560435 PRG2P13727 222 aa2.57□□□□□ -2
SPG11-222ENST00000560435 RYKP34925 604 aa2.57□□□□□ -2
SPG11-222ENST00000560435 GNL1P36915 607 aaPredicted RBP2.57□□□□□ -2
SPG11-222ENST00000560435 MMP14P50281 582 aa2.57□□□□□ -2
SPG11-222ENST00000560435 PNLIPRP1P54315 467 aa2.57□□□□□ -2
SPG11-222ENST00000560435 SLC8A3P57103 927 aa2.57□□□□□ -2
SPG11-222ENST00000560435 PDCLQ13371 301 aa2.57□□□□□ -2
SPG11-222ENST00000560435 CTF1Q16619 201 aa2.57□□□□□ -2
SPG11-222ENST00000560435 ZFP69Q49AA0 526 aa2.57□□□□□ -2
SPG11-222ENST00000560435 FBXO43Q4G163 708 aa2.57□□□□□ -2
SPG11-222ENST00000560435 SIRPB2Q5JXA9 342 aa2.57□□□□□ -2
SPG11-222ENST00000560435 FAM53AQ6NSI3 398 aaPredicted RBP2.57□□□□□ -2
SPG11-222ENST00000560435 CES5AQ6NT32 575 aa2.57□□□□□ -2
SPG11-222ENST00000560435 METTL7BQ6UX53 244 aa2.57□□□□□ -2
SPG11-222ENST00000560435 B3GNT6Q6ZMB0 384 aa2.57□□□□□ -2
SPG11-222ENST00000560435 SYTL1Q8IYJ3 562 aa2.57□□□□□ -2
SPG11-222ENST00000560435 RNF113BQ8IZP6 322 aaKnown RBP2.57□□□□□ -2
SPG11-222ENST00000560435 PARP16Q8N5Y8 322 aa2.57□□□□□ -2
SPG11-222ENST00000560435 STPG4Q8N801 248 aa2.57□□□□□ -2
SPG11-222ENST00000560435 SCAMP5Q8TAC9 235 aa2.57□□□□□ -2
SPG11-222ENST00000560435 ZNF473Q8WTR7 871 aaKnown RBP2.57□□□□□ -2
SPG11-222ENST00000560435 SNAPC3Q92966 411 aa2.57□□□□□ -2
SPG11-222ENST00000560435 SCRN2Q96FV2 425 aa2.57□□□□□ -2
SPG11-222ENST00000560435 POM121L2Q96KW2 1035 aa2.57□□□□□ -2
SPG11-222ENST00000560435 HERC2P3Q9BVR0 1158 aa2.57□□□□□ -2
SPG11-222ENST00000560435 CNGB3Q9NQW8 809 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms