RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 LOXL2Q9Y4K0 774 aa11.23□□□□□ -0.61
LINC02253-202ENST00000560314 OR1A2Q9Y585 309 aa11.23□□□□□ -0.61
LINC02253-202ENST00000560314 HEMK1Q9Y5R4 338 aaPredicted RBP11.23□□□□□ -0.61
LINC02253-202ENST00000560314 HECTD1Q9ULT8 2610 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 CASC3O15234 703 aaKnown RBP11.22□□□□□ -0.61
LINC02253-202ENST00000560314 INSIG1O15503 277 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 EFSO43281 561 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 CCP110O43303 1012 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 CREB3O43889 395 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 NOBOXO60393 691 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 PRAMEF11O60813 436 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 WISP1O95388 367 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 PCCBP05166 539 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 HOXC4P09017 264 aaPredicted RBP11.22□□□□□ -0.61
LINC02253-202ENST00000560314 ITIH2P19823 946 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 LIG3P49916 1009 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 CSRP3P50461 194 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 TPI1P60174 286 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 ZFP36L1Q07352 338 aaKnown RBP11.22□□□□□ -0.61
LINC02253-202ENST00000560314 SYCP1Q15431 976 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 CYTH1Q15438 398 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 CLPPQ16740 277 aaPredicted RBP11.22□□□□□ -0.61
LINC02253-202ENST00000560314 CLEC16AQ2KHT3 1053 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
LINC02253-202ENST00000560314 C14orf28Q4W4Y0 310 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 DNAJC24Q6P3W2 148 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 RD3Q7Z3Z2 195 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 SPRED1Q7Z699 444 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 PYROXD2Q8N2H3 581 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 ZSCAN1Q8NBB4 408 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 KIAA1524Q8TCG1 905 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 MAGEB5Q9BZ81 275 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 FAM117AQ9C073 453 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 LRRC19Q9H756 370 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 FAM207AQ9NSI2 230 aaPredicted RBP11.22□□□□□ -0.61
LINC02253-202ENST00000560314 SAMSN1Q9NSI8 373 aaKnown RBP11.22□□□□□ -0.61
LINC02253-202ENST00000560314 TAB2Q9NYJ8 693 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 AKAP7Q9P0M2 348 aaPredicted RBP11.22□□□□□ -0.61
LINC02253-202ENST00000560314 FZD10Q9ULW2 581 aa11.22□□□□□ -0.61
LINC02253-202ENST00000560314 A0A1W2PQC6 194 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 TCRBV5S1A1TA0A578 114 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 ARHGAP42A6NI28 874 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.21□□□□□ -0.61
LINC02253-202ENST00000560314 PDE2AO00408 941 aaPredicted RBP11.21□□□□□ -0.61
LINC02253-202ENST00000560314 ZW10O43264 779 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 ELFN1P0C7U0 828 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 HGFP14210 728 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 TRIM23P36406 574 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 POLR2LP62875 67 aaKnown RBP11.21□□□□□ -0.61
LINC02253-202ENST00000560314 NFATC3Q12968 1075 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 ARHGEF7Q14155 803 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 HLTFQ14527 1009 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC02253-202ENST00000560314 RFTN1Q14699 578 aaPredicted RBP11.21□□□□□ -0.61
LINC02253-202ENST00000560314 MANEAQ5SRI9 462 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 PPP1R2P3Q6NXS1 205 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 SCYL2Q6P3W7 929 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 PRICKLE2Q7Z3G6 844 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 TAF8Q7Z7C8 310 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 PHLDB2Q86SQ0 1253 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 SLITRK4Q8IW52 837 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 FAM46DQ8NEK8 389 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 ENOX1Q8TC92 643 aaKnown RBP11.21□□□□□ -0.61
LINC02253-202ENST00000560314 OR1E3Q8WZA6 343 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 SPOCK2Q92563 424 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 ECHDC3Q96DC8 303 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 MCEEQ96PE7 176 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 ARHGAP9Q9BRR9 750 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 CNPY3Q9BT09 278 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 NUP62CLQ9H1M0 184 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 WDR26Q9H7D7 661 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 FGF22Q9HCT0 170 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 STARD5Q9NSY2 213 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 KCTD5Q9NXV2 234 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 PCDHB11Q9Y5F2 797 aa11.21□□□□□ -0.61
LINC02253-202ENST00000560314 SDK2Q58EX2 2172 aa11.21□□□□□ -0.62
LINC02253-202ENST00000560314 ZFC3H1O60293 1989 aaKnown RBP11.2□□□□□ -0.62
LINC02253-202ENST00000560314 PRAMEF33A0A0G2JMD5 474 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 HGSO14964 777 aaPredicted RBP11.2□□□□□ -0.62
LINC02253-202ENST00000560314 PRAMEF10O60809 474 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 PALMO75781 387 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 RECQL5O94762 991 aaPredicted RBP11.2□□□□□ -0.62
LINC02253-202ENST00000560314 NFKBIAP25963 317 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 BCL2L1Q07817 233 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 NSUN2Q08J23 767 aaKnown RBP eCLIP11.2□□□□□ -0.62
LINC02253-202ENST00000560314 RALGDSQ12967 914 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 PEX6Q13608 980 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 NR1D2Q14995 579 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 KRT31Q15323 416 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 TCEA2Q15560 299 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 LINC00303Q3SY05 128 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 MAP9Q49MG5 647 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 PPP1R15BQ5SWA1 713 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 TMEM164Q5U3C3 297 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 CDKAL1Q5VV42 579 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 AFMIDQ63HM1 303 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 SPECC1LQ69YQ0 1117 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 LIPIQ6XZB0 460 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 DPPA4Q7L190 304 aa11.2□□□□□ -0.62
LINC02253-202ENST00000560314 ZNF438Q7Z4V0 828 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms