RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 HS3ST3A1Q9Y663 406 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 DOCK9Q9BZ29 2069 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 LOC285095A0A1B0GVY8 99 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 A0A1W2PQU0 124 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 CAPN8A6NHC0 703 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 FAM47DPA6NHR8 397 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 DFNA5O60443 496 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 PHF2O75151 1096 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 PPFIA2O75334 1257 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 FSBPO95073 299 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 SYPP08247 313 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 MMP2P08253 660 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 ELFN1P0C7U0 828 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 HNRNPA2B1P22626 353 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 AKT2P31751 481 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 VIPR1P32241 457 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 CD68P34810 354 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 AFF3P51826 1226 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 FAM193AP78312 1265 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 CREB5Q02930 508 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 CKAP4Q07065 602 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 SRSF5Q13243 272 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 STAT4Q14765 748 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 POM121L1PQ3SYA9 428 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 ZDHHC20Q5W0Z9 365 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 IL27RAQ6UWB1 636 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 ADAT2Q7Z6V5 191 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 NLRP8Q86W28 1048 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 KLHDC8BQ8IXV7 354 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 PRELID2Q8N945 189 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 COG1Q8WTW3 980 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 SLCO2A1Q92959 643 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 PILRBQ9UKJ0 227 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 GON4LQ3T8J9 2241 aa12.11□□□□□ -0.47
RABGGTA-215ENST00000560207 TP53BP1Q12888 1972 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 E7EVH7 732 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 BCAT2O15382 392 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 IFNB1P01574 187 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 IGHV4-34P06331 123 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 ZNF806P0C7X5 589 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 COILP38432 576 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 MPLP40238 635 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 ABL2P42684 1182 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 WNT3AP56704 352 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 SARNPP82979 210 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 SNX1Q13596 522 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 CSRP2Q16527 193 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 ZNF284Q2VY69 593 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 SLC23A3Q6PIS1 610 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 CCDC137Q6PK04 289 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 SYT10Q6XYQ8 523 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 CREG2Q8IUH2 290 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 SLC41A1Q8IVJ1 513 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 NRSN1Q8IZ57 195 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 FRMD1Q8N878 549 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 MFSD2AQ8NA29 543 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 KIF18AQ8NI77 898 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 CCDC110Q8TBZ0 833 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 ATG4AQ8WYN0 398 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 TRIB3Q96RU7 358 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 NUSAP1Q9BXS6 441 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 CEP41Q9BYV8 373 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 ARNT2Q9HBZ2 717 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 EIF2B3Q9NR50 452 aaKnown RBP12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 PCYOX1Q9UHG3 505 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 SLC6A14Q9UN76 642 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 CHKBQ9Y259 395 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 SDK1Q7Z5N4 2213 aa12.1□□□□□ -0.47
RABGGTA-215ENST00000560207 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 PRR23AA6NEV1 266 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 SMAPO00193 183 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 PDE2AO00408 941 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 FPGTO14772 594 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 KHNYNO15037 678 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 LZTS3O60299 673 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 PMPCBO75439 489 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 ECEL1O95672 775 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 MT-CYBP00156 380 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 PRLP01236 227 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 TEAD1P28347 426 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 PTGER3P43115 390 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 LMAN1P49257 510 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 LIG3P49916 1009 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 METAP1P53582 386 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 YPEL5P62699 121 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 SLC1A5Q15758 541 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 PLA2G2CQ5R387 149 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 KDELC1Q6UW63 502 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 RANBP10Q6VN20 620 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 LIPIQ6XZB0 460 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 ZNF765Q7L2R6 523 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 PCGF5Q86SE9 256 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 OXR1Q8N573 874 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 SPATA22Q8NHS9 363 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 DTX3LQ8TDB6 740 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 LRRN4Q8WUT4 740 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 SNX19Q92543 992 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 PIGKQ92643 395 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 FAM122AQ96E09 287 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms