RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 CLN3Q13286 438 aa17.5■□□□□ 0.39
CRTC3-208ENST00000560098 EIF3IQ13347 325 aaKnown RBP17.5■□□□□ 0.39
CRTC3-208ENST00000560098 MAMLD1Q13495 774 aa17.5■□□□□ 0.39
CRTC3-208ENST00000560098 CA9Q16790 459 aa17.5■□□□□ 0.39
CRTC3-208ENST00000560098 KCTD16Q68DU8 428 aa17.5■□□□□ 0.39
CRTC3-208ENST00000560098 SASS6Q6UVJ0 657 aa17.5■□□□□ 0.39
CRTC3-208ENST00000560098 PLA2G15Q8NCC3 412 aa17.5■□□□□ 0.39
CRTC3-208ENST00000560098 PDXPQ96GD0 296 aa17.5■□□□□ 0.39
CRTC3-208ENST00000560098 EIF3CQ99613 913 aaKnown RBP17.5■□□□□ 0.39
CRTC3-208ENST00000560098 PARVAQ9NVD7 372 aa17.5■□□□□ 0.39
CRTC3-208ENST00000560098 TAS2R14Q9NYV8 317 aa17.5■□□□□ 0.39
CRTC3-208ENST00000560098 A0A1W2PQM1 296 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 D6RAR5 112 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 DAPK3O43293 454 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 RECQL5O94762 991 aaPredicted RBP17.49■□□□□ 0.39
CRTC3-208ENST00000560098 INHBCP55103 352 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 KIAA1024LP59773 190 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 BCL2L1Q07817 233 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 RALGDSQ12967 914 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 ERMARDQ5T6L9 678 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 PPP1R2P3Q6NXS1 205 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 CCDC81Q6ZN84 652 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 RFX8Q6ZV50 586 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 RAB11FIP2Q7L804 512 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 APTXQ7Z2E3 356 aaKnown RBP17.49■□□□□ 0.39
CRTC3-208ENST00000560098 IRF2BP2Q7Z5L9 587 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 FBXO39Q8N4B4 442 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 GPR156Q8NFN8 814 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 OR56A4Q8NGH8 313 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 ECHDC3Q96DC8 303 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 CINPQ9BW66 212 aaPredicted RBP17.49■□□□□ 0.39
CRTC3-208ENST00000560098 FOXP3Q9BZS1 431 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 STRADBQ9C0K7 418 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 LRRN3Q9H3W5 708 aa17.49■□□□□ 0.39
CRTC3-208ENST00000560098 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.49■□□□□ 0.39
CRTC3-208ENST00000560098 SETXQ7Z333 2677 aaKnown RBP17.49■□□□□ 0.39
CRTC3-208ENST00000560098 TMEM202A6NGA9 273 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 CACNB4O00305 520 aaPredicted RBP17.48■□□□□ 0.39
CRTC3-208ENST00000560098 ELFN1P0C7U0 828 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 TNFAIP3P21580 790 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 UGT1A5P35504 534 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 POLR2LP62875 67 aaKnown RBP17.48■□□□□ 0.39
CRTC3-208ENST00000560098 NSUN2Q08J23 767 aaKnown RBP eCLIP17.48■□□□□ 0.39
CRTC3-208ENST00000560098 LY6DQ14210 128 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 RFTN1Q14699 578 aaPredicted RBP17.48■□□□□ 0.39
CRTC3-208ENST00000560098 STX1AQ16623 288 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 ZSCAN23Q3MJ62 389 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 AFMIDQ63HM1 303 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 LIPIQ6XZB0 460 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 ARHGAP12Q8IWW6 846 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 ARFGAP1Q8N6T3 406 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 PAF1Q8N7H5 531 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 OR1E3Q8WZA6 343 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 FUBP1Q96AE4 644 aaKnown RBP17.48■□□□□ 0.39
CRTC3-208ENST00000560098 TMEM74Q96NL1 305 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 PEBP4Q96S96 227 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 KCTD15Q96SI1 283 aaPredicted RBP17.48■□□□□ 0.39
CRTC3-208ENST00000560098 SYT11Q9BT88 431 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 SNRNP25Q9BV90 132 aaKnown RBP17.48■□□□□ 0.39
CRTC3-208ENST00000560098 SEMA4CQ9C0C4 833 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 SP110Q9HB58 689 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 PCSK1NQ9UHG2 260 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 PCDHGA7Q9Y5G6 932 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 LRRK1Q38SD2 2015 aa17.48■□□□□ 0.39
CRTC3-208ENST00000560098 TMCO5BA8MYB1 307 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 DFFAO00273 331 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 HOXC4P09017 264 aaPredicted RBP17.47■□□□□ 0.39
CRTC3-208ENST00000560098 GLB1P16278 677 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 ERCC2P18074 760 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 KELP23276 732 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 CCKBRP32239 447 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 IL10RBQ08334 325 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 KIAA1614Q5VZ46 1190 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 PLEKHA7Q6IQ23 1121 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 OGFOD3Q6PK18 319 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 DPPA4Q7L190 304 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 TAF8Q7Z7C8 310 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 CCNJLQ8IV13 435 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 FAM46DQ8NEK8 389 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 CCNL2Q96S94 520 aaPredicted RBP17.47■□□□□ 0.39
CRTC3-208ENST00000560098 HSD3B7Q9H2F3 369 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 FGF22Q9HCT0 170 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 APPL1Q9UKG1 709 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 TRAFD1O14545 582 aaPredicted RBP17.47■□□□□ 0.39
CRTC3-208ENST00000560098 TNFRSF10CO14798 259 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 ATMINO43313 823 aaPredicted RBP17.47■□□□□ 0.39
CRTC3-208ENST00000560098 PNLIPP16233 465 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 SLC5A2P31639 672 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 TRIM23P36406 574 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 SCNN1BP51168 640 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 NCAPHQ15003 741 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 PPP6R3Q5H9R7 873 aaPredicted RBP17.47■□□□□ 0.39
CRTC3-208ENST00000560098 CERCAMQ5T4B2 595 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 ARHGAP36Q6ZRI8 547 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 JAMLQ86YT9 394 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 NPWQ8N729 165 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 MRPL40Q9NQ50 206 aaKnown RBP17.47■□□□□ 0.39
CRTC3-208ENST00000560098 ATXN7L1Q9ULK2 861 aaPredicted RBP17.47■□□□□ 0.39
CRTC3-208ENST00000560098 MYO6Q9UM54 1294 aa17.47■□□□□ 0.39
CRTC3-208ENST00000560098 LRP4O75096 1905 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms