RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 JUNDP17535 347 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 MX2P20592 715 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 NFKBIAP25963 317 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 SLC1A1P43005 524 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 MAGEA1P43355 309 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 NOP2P46087 812 aaKnown RBP12.65□□□□□ -0.38
LRRC28-214ENST00000559433 DUSP3P51452 185 aaPredicted RBP12.65□□□□□ -0.38
LRRC28-214ENST00000559433 TRAF2Q12933 501 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 EIF2B5Q13144 721 aaKnown RBP12.65□□□□□ -0.38
LRRC28-214ENST00000559433 ILKQ13418 452 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 TCEAL1Q15170 157 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 SPA17Q15506 151 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 WSCD2Q2TBF2 565 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 PROX2Q3B8N5 592 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 MACC1Q6ZN28 852 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 DPPA4Q7L190 304 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 RHOT1Q8IXI2 618 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 TEX26Q8N6G2 289 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 ZNF548Q8NEK5 533 aaPredicted RBP12.65□□□□□ -0.38
LRRC28-214ENST00000559433 OR4C6Q8NH72 309 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.65□□□□□ -0.38
LRRC28-214ENST00000559433 LRRN4Q8WUT4 740 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 MAML1Q92585 1016 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 RNF157Q96PX1 679 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 SEMA3CQ99985 751 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 DUSP23Q9BVJ7 150 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 POLR1EQ9GZS1 481 aaKnown RBP12.65□□□□□ -0.38
LRRC28-214ENST00000559433 HAUS2Q9NVX0 235 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 NLGN3Q9NZ94 848 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 B4GALT6Q9UBX8 382 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 KLF15Q9UIH9 416 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 HYOU1Q9Y4L1 999 aa12.65□□□□□ -0.38
LRRC28-214ENST00000559433 GOLGA4Q13439 2230 aaKnown RBP12.65□□□□□ -0.38
LRRC28-214ENST00000559433 CACNA1BQ00975 2339 aa12.65□□□□□ -0.39
LRRC28-214ENST00000559433 MYLKQ15746 1914 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 WDFY3Q8IZQ1 3526 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 C3orf70A6NLC5 250 aaPredicted RBP12.64□□□□□ -0.39
LRRC28-214ENST00000559433 AQP9O43315 295 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 KRT37O76014 449 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 LCA5LO95447 670 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 COMTP21964 271 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 CCNCP24863 283 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 VIPR1P32241 457 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 CYLC1P35663 651 aaPredicted RBP12.64□□□□□ -0.39
LRRC28-214ENST00000559433 E2F1Q01094 437 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 INPP5AQ14642 412 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 ACOX1Q15067 660 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 AGERQ15109 404 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 SMAD1Q15797 465 aaKnown RBP12.64□□□□□ -0.39
LRRC28-214ENST00000559433 FAXCQ5TGI0 409 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 LRRC38Q5VT99 294 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 LIPIQ6XZB0 460 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 CCDC170Q8IYT3 715 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 PHACTR4Q8IZ21 702 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 RBFAQ8N0V3 343 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.64□□□□□ -0.39
LRRC28-214ENST00000559433 CCNYQ8ND76 341 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 LMX1AQ8TE12 382 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 GLMNQ92990 594 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 FATE1Q969F0 183 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 TSGA13Q96PP4 275 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 PANX2Q96RD6 677 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 MAK16Q9BXY0 300 aaKnown RBP12.64□□□□□ -0.39
LRRC28-214ENST00000559433 SLC13A1Q9BZW2 595 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 ABCG4Q9H172 646 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 LUC7LQ9NQ29 371 aaKnown RBP12.64□□□□□ -0.39
LRRC28-214ENST00000559433 RBM22Q9NW64 420 aaKnown RBP eCLIP12.64□□□□□ -0.39
LRRC28-214ENST00000559433 DDX56Q9NY93 547 aaKnown RBP12.64□□□□□ -0.39
LRRC28-214ENST00000559433 DTLQ9NZJ0 730 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 APOBEC3BQ9UH17 382 aaKnown RBP12.64□□□□□ -0.39
LRRC28-214ENST00000559433 OR1A2Q9Y585 309 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 PCDHA13Q9Y5I0 950 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 HEY1Q9Y5J3 304 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 RAI2Q9Y5P3 530 aa12.64□□□□□ -0.39
LRRC28-214ENST00000559433 KMT2BQ9UMN6 2715 aaPredicted RBP12.64□□□□□ -0.39
LRRC28-214ENST00000559433 FAM149AA5PLN7 773 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 K7ESM1 405 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 APOL1O14791 398 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 SCAMP1O15126 338 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 RECQL5O94762 991 aaPredicted RBP12.63□□□□□ -0.39
LRRC28-214ENST00000559433 PGLSO95336 258 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 CYP2A6P11509 494 aaPredicted RBP12.63□□□□□ -0.39
LRRC28-214ENST00000559433 KRT10P13645 584 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 CCNB1P14635 433 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 ACP1P24666 158 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 HTR1BP28222 390 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 PEX5P50542 639 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 DSC2Q02487 901 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 PPARDQ03181 441 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 SLC10A2Q12908 348 aaPredicted RBP12.63□□□□□ -0.39
LRRC28-214ENST00000559433 MTM1Q13496 603 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 NFATC4Q14934 902 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 ARMC12Q5T9G4 340 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 DENND2CQ68D51 928 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 GAS2L3Q86XJ1 694 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 VSIG1Q86XK7 387 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 MARCH9Q86YJ5 346 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 RFX6Q8HWS3 928 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 CCDC13Q8IYE1 715 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 PLD5Q8N7P1 536 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms