RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 PIH1D1Q9NWS0 290 aaKnown RBP10.95□□□□□ -0.66
TPM1-217ENST00000559108 EIF2B4Q9UI10 523 aaKnown RBP10.95□□□□□ -0.66
TPM1-217ENST00000559108 NCKAP1Q9Y2A7 1128 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 PPIL1Q9Y3C6 166 aa10.95□□□□□ -0.66
TPM1-217ENST00000559108 CFAP69A5D8W1 941 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 CAPN8A6NHC0 703 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 PROB1E7EW31 1015 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 MAP3K13O43283 966 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 NEBLO76041 1014 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 EPN2O95208 641 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 C6P13671 934 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 DEKP35659 375 aaKnown RBP10.94□□□□□ -0.66
TPM1-217ENST00000559108 VPS41P49754 854 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 LIG3P49916 1009 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 FAM193AP78312 1265 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 C2orf54Q08AI8 447 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 GRM3Q14832 879 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 TPRG1LQ5T0D9 272 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 PEAR1Q5VY43 1037 aaPredicted RBP10.94□□□□□ -0.66
TPM1-217ENST00000559108 ANKRD22Q5VYY1 191 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 TCEAL6Q6IPX3 200 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 CCDC137Q6PK04 289 aaKnown RBP10.94□□□□□ -0.66
TPM1-217ENST00000559108 CRTC1Q6UUV9 634 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 RANBP10Q6VN20 620 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 LIPIQ6XZB0 460 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 SLC36A4Q6YBV0 504 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 ARHGEF18Q6ZSZ5 1173 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 ZNF534Q76KX8 674 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 LPCAT2Q7L5N7 544 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 TRIM69Q86WT6 500 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 HORMAD1Q86X24 394 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 KLHL7Q8IXQ5 586 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 DCLK2Q8N568 766 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 SLC25A41Q8N5S1 370 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 PDCD7Q8N8D1 485 aaKnown RBP10.94□□□□□ -0.66
TPM1-217ENST00000559108 CADM4Q8NFZ8 388 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 DNASE2BQ8WZ79 361 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 TCEAL3Q969E4 200 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 FEM1CQ96JP0 617 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 C1QTNF2Q9BXJ5 285 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 ETNK1Q9HBU6 452 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 PREBQ9HCU5 417 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 DYRK4Q9NR20 520 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 FAM153AQ9UHL3 310 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 PILRBQ9UKJ0 227 aa10.94□□□□□ -0.66
TPM1-217ENST00000559108 CACNA1EQ15878 2313 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 LRRC72A6NJI9 287 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 ANKRD66B4E2M5 251 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 H0Y8X5 98 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 TP73O15350 636 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 SLC31A1O15431 190 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 NDUFS2O75306 463 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 HEXIM1O94992 359 aaKnown RBP10.93□□□□□ -0.66
TPM1-217ENST00000559108 PCDH8O95206 1070 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 NDST3O95803 873 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 CES1P23141 567 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 CA5AP35218 305 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 GRIA4P48058 902 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 CCR5P51681 352 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 TERF1P54274 439 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 CLDN2P57739 230 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 CDK18Q07002 472 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 SEMA5AQ13591 1074 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 PTPRCAPQ14761 206 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 SLC1A5Q15758 541 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 PARP6Q2NL67 630 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 LYSMD4Q5XG99 296 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 LRRC66Q68CR7 880 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 KCTD16Q68DU8 428 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 ITPRIPL1Q6GPH6 555 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 ZC3H14Q6PJT7 736 aaKnown RBP10.93□□□□□ -0.66
TPM1-217ENST00000559108 LYSMD3Q7Z3D4 306 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 ZNF572Q7Z3I7 529 aaPredicted RBP10.93□□□□□ -0.66
TPM1-217ENST00000559108 TTC30BQ8N4P2 665 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 ZCCHC9Q8N567 271 aaKnown RBP10.93□□□□□ -0.66
TPM1-217ENST00000559108 TMEM145Q8NBT3 493 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 LRRN4CLQ8ND94 238 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 MAIP1Q8WWC4 291 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 SNX19Q92543 992 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 ZNF592Q92610 1267 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 RAB7BQ96AH8 199 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 SCRN2Q96FV2 425 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 COQ10AQ96MF6 247 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 TRIM51Q9BSJ1 452 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 ARRDC1-AS1Q9H2J1 176 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 MBNL1Q9NR56 388 aaKnown RBP10.93□□□□□ -0.66
TPM1-217ENST00000559108 RAB6BQ9NRW1 208 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 VPS45Q9NRW7 570 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 RXFP3Q9NSD7 469 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 PHTF1Q9UMS5 762 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 FRYLO94915 3013 aa10.93□□□□□ -0.66
TPM1-217ENST00000559108 A0A1W2PPC4 97 aa10.92□□□□□ -0.66
TPM1-217ENST00000559108 A0A1W2PR77 199 aa10.92□□□□□ -0.66
TPM1-217ENST00000559108 MEI4A8MW99 385 aa10.92□□□□□ -0.66
TPM1-217ENST00000559108 K7ESM1 405 aa10.92□□□□□ -0.66
TPM1-217ENST00000559108 TSPAN6O43657 245 aa10.92□□□□□ -0.66
TPM1-217ENST00000559108 TMEM63AO94886 807 aa10.92□□□□□ -0.66
TPM1-217ENST00000559108 CLDN7O95471 211 aa10.92□□□□□ -0.66
TPM1-217ENST00000559108 PAK4O96013 591 aaPredicted RBP10.92□□□□□ -0.66
TPM1-217ENST00000559108 KRT14P02533 472 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms