RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 NOXA1Q86UR1 476 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 HAPLN4Q86UW8 402 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 TMC8Q8IU68 726 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CREBRFQ8IUR6 639 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 FAM185AQ8N0U4 392 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 PARP16Q8N5Y8 322 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 ZBTB2Q8N680 514 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 TMCO5AQ8N6Q1 288 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 EXD3Q8N9H8 876 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 MSANTD4Q8NCY6 345 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 OR14L1PQ8NHC6 308 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 HUS1BQ8NHY5 278 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 OSR1Q8TAX0 266 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CXorf38Q8TB03 319 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 SETD6Q8TBK2 473 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 SH3RF3Q8TEJ3 882 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 HDAC7Q8WUI4 952 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 LINC00476Q8WZB0 136 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 FBXL8Q96CD0 374 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 TMCO6Q96DC7 493 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 RITA1Q96K30 269 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 DGAT2Q96PD7 388 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 RAB3IPQ96QF0 476 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 OR2A14Q96R47 310 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 NUDCD1Q96RS6 583 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CITED2Q99967 270 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 TMEM47Q9BQJ4 181 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 DUSP26Q9BV47 211 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 C1QTNF1Q9BXJ1 281 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 FRMD8Q9BZ67 464 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 EDEM3Q9BZQ6 932 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 ANKRD2Q9GZV1 360 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 TKTL2Q9H0I9 626 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CDT1Q9H211 546 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 PLEKHA4Q9H4M7 779 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 OPA3Q9H6K4 179 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 MAGEE1Q9HCI5 957 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 WDR6Q9NNW5 1121 aaKnown RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 GPR108Q9NPR9 543 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 PSD3Q9NYI0 1048 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 C5AR2Q9P296 337 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 WDR35Q9P2L0 1181 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 SLC17A6Q9P2U8 582 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 AMACRQ9UHK6 382 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 GTF3C4Q9UKN8 822 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 ERVK-11Q9UQG0 969 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 EPN1Q9Y6I3 576 aaPredicted RBP2.37□□□□□ -2.03
GABPB1-209ENST00000559100 CEPT1Q9Y6K0 416 aa2.37□□□□□ -2.03
GABPB1-209ENST00000559100 TRBC2A0A5B9 178 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 C1orf226A1L170 272 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 TRIM64A6NGJ6 449 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 TRIM64BA6NI03 449 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 FAM90A8PA6NJQ4 464 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 SMTNL1A8MU46 457 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 A8MXE2 369 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ADAMDEC1O15204 470 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 WDR46O15213 610 aaKnown RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 OGG1O15527 345 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 JRKO75564 520 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 CSPG5O95196 566 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 HIST1H2ABP04908 130 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 TPOP07202 933 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 FAM90A13PP0C7W8 464 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 FAM90A24PP0C7X0 464 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ACTN1P12814 892 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 MMP9P14780 707 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 CTPS1P17812 591 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ERCC2P18074 760 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 HIST1H2ADP20671 130 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 TBXAS1P24557 533 aaPredicted RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 HOXA7P31268 230 aaPredicted RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 SLC16A2P36021 539 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ATP6V1E1P36543 226 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 RARRES1P49788 294 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF41P51814 821 aaPredicted RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 CSE1LP55060 971 aaKnown RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 KRT83P78385 493 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 SIM1P81133 766 aaPredicted RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 RBP5P82980 135 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 TFCP2Q12800 502 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 GRSF1Q12849 480 aaKnown RBP eCLIP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 BFSP1Q12934 665 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 PPP2R5CQ13362 524 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 FOXE3Q13461 319 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 NAE1Q13564 534 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 STIM1Q13586 685 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ALCAMQ13740 583 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 PGM5Q15124 567 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ADIPOQQ15848 244 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 PLEKHO1Q53GL0 409 aaPredicted RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ESCO2Q56NI9 601 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ODF2Q5BJF6 829 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF628Q5EBL2 1059 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 KIAA1755Q5JYT7 1200 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 TTC39AQ5SRH9 613 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 C6orf141Q5SZD1 244 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 NCAPH2Q6IBW4 605 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 JADE1Q6IE81 842 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF793Q6ZN11 406 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 MFSD6Q6ZSS7 791 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms