RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 NEPROQ6NW34 567 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 APCDD1Q8J025 514 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 BBS5Q8N3I7 341 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 PNPLA1Q8N8W4 532 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 C10orf82Q8WW14 230 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 SUSD6Q92537 303 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 SMARCD2Q92925 531 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 VOPP1Q96AW1 172 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 RSPRY1Q96DX4 576 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 NECTIN4Q96NY8 510 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 SMIM14Q96QK8 99 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 C1QTNF1Q9BXJ1 281 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 ARL2BPQ9Y2Y0 163 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 SPO11Q9Y5K1 396 aa13.02□□□□□ -0.32
SMAD3-207ENST00000558763 SCN8AQ9UQD0 1980 aa13.02□□□□□ -0.33
SMAD3-207ENST00000558763 CCT8L1PA6NM43 557 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 BIRC5O15392 142 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 C2P06681 752 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 PDHA1P08559 390 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 PIRTP0C851 137 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 SLC35E2BP0CK96 405 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 PAMP19021 973 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 PSMA3P25788 255 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 TRAF2Q12933 501 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 USP4Q13107 963 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 CDH18Q13634 790 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 PTPRCAPQ14761 206 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 ZNF77Q15935 545 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 KIAA0408Q6ZU52 694 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 MFN1Q8IWA4 741 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 CELF5Q8N6W0 485 aaKnown RBP13.01□□□□□ -0.33
SMAD3-207ENST00000558763 PEX13Q92968 403 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 FAM167BQ9BTA0 163 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 MFSD1Q9H3U5 465 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 PLK2Q9NYY3 685 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 DCDC2Q9UHG0 476 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 VPS28Q9UK41 221 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 FBXO5Q9UKT4 447 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 INTS6Q9UL03 887 aaKnown RBP13.01□□□□□ -0.33
SMAD3-207ENST00000558763 CHKBQ9Y259 395 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 ZNF510Q9Y2H8 683 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 ARL5AQ9Y689 179 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 A0A096LPK6 155 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 SLC7A4O43246 635 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 MBTPS2O43462 519 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 SNNO75324 88 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-207ENST00000558763 ZNF140P52738 457 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-207ENST00000558763 OCRLQ01968 901 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 NSUN2Q08J23 767 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMAD3-207ENST00000558763 BST1Q10588 318 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 LMAN2Q12907 356 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 SMAD4Q13485 552 aaKnown RBP13.01□□□□□ -0.33
SMAD3-207ENST00000558763 MBLAC2Q68D91 279 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 NCEH1Q6PIU2 408 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 ATG14Q6ZNE5 492 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 TRPM8Q7Z2W7 1104 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 GALNT7Q86SF2 657 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 CEP97Q8IW35 865 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 CENPLQ8N0S6 344 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-207ENST00000558763 TMEM151AQ8N4L1 468 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 BRSK1Q8TDC3 778 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 IFT43Q96FT9 208 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 THOC1Q96FV9 657 aaKnown RBP13.01□□□□□ -0.33
SMAD3-207ENST00000558763 DNAJC1Q96KC8 554 aaKnown RBP13.01□□□□□ -0.33
SMAD3-207ENST00000558763 LRRC3BQ96PB8 259 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 TSSK1BQ9BXA7 367 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 C20orf27Q9GZN8 174 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMAD3-207ENST00000558763 MARCH4Q9P2E8 410 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-207ENST00000558763 SLC39A10Q9ULF5 831 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 RIMKLBQ9ULI2 386 aa13.01□□□□□ -0.33
SMAD3-207ENST00000558763 TYW5A2RUC4 315 aaKnown RBP13□□□□□ -0.33
SMAD3-207ENST00000558763 OR51F1A6NGY5 319 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 K7ERQ8 282 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 ZNF821O75541 412 aaPredicted RBP13□□□□□ -0.33
SMAD3-207ENST00000558763 HAUS5O94927 633 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 MPOP05164 745 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 FGF3P11487 239 aaPredicted RBP13□□□□□ -0.33
SMAD3-207ENST00000558763 LAMP2P13473 410 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 BMP1P13497 986 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 FCARP24071 287 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 CD70P32970 193 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 HADHAP40939 763 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 LEPRP48357 1165 aaKnown RBP13□□□□□ -0.33
SMAD3-207ENST00000558763 IRX4P78413 519 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 OVGP1Q12889 678 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 DBN1Q16643 649 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 UGP2Q16851 508 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 LACTB2Q53H82 288 aaPredicted RBP13□□□□□ -0.33
SMAD3-207ENST00000558763 CNSTQ6PJW8 725 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 NLRP9Q7RTR0 991 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 CILP2Q8IUL8 1156 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 SPNS2Q8IVW8 549 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 OR13C4Q8NGS5 318 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 OR6Y1Q8NGX8 325 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 FIBINQ8TAL6 211 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 RAB3IL1Q8TBN0 382 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 BLOC1S5Q8TDH9 187 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 DDI1Q8WTU0 396 aa13□□□□□ -0.33
SMAD3-207ENST00000558763 HDAC10Q969S8 669 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms