RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 C6P13671 934 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 RBL1P28749 1068 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 LIG3P49916 1009 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 EPHB1P54762 984 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 CLDN2P57739 230 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 SKOR1P84550 965 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 CCDC173Q0VFZ6 552 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 WASHC5Q12768 1159 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 KLF1Q13351 362 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-205ENST00000558428 KIF19Q2TAC6 998 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 UAP1L1Q3KQV9 507 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 DARS2Q6PI48 645 aaKnown RBP12.42□□□□□ -0.42
SMAD3-205ENST00000558428 IL27RAQ6UWB1 636 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 DPPA4Q7L190 304 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 PID1Q7Z2X4 250 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 REXO1L1PQ8IX06 675 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 MFSD2AQ8NA29 543 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 TTC13Q8NBP0 860 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 PIH1D2Q8WWB5 315 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 ASB12Q8WXK4 309 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 TEKT5Q96M29 485 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 RBM15Q96T37 977 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMAD3-205ENST00000558428 VAT1Q99536 393 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 C1QTNF7Q9BXJ2 289 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 SLC25A51Q9H1U9 297 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 GAREM1Q9H706 876 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 PCDH9Q9HC56 1237 aa12.42□□□□□ -0.42
SMAD3-205ENST00000558428 TCRBV7S2A1N4TA0A589 114 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 H0Y8X5 98 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 TLR4O00206 839 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 SLC30A4O14863 429 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 LZTS3O60299 673 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-205ENST00000558428 MAGEC1O60732 1142 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 OPHN1O60890 802 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 THEGLP0DJG4 465 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 CTPS1P17812 591 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 SDHBP21912 280 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 VIPR1P32241 457 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 CD68P34810 354 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-205ENST00000558428 CTSKP43235 329 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 OVGP1Q12889 678 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 RALGDSQ12967 914 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 HLA-BQ31612 363 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 LIPIQ6XZB0 460 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 GCNT7Q6ZNI0 430 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 USP45Q70EL2 814 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 PTAR1Q7Z6K3 402 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-205ENST00000558428 IQCHQ86VS3 1027 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 NDUFAF2Q8N183 169 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 ZNF567Q8N184 647 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 DENND6BQ8NEG7 585 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 LPCAT1Q8NF37 534 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 RMDN1Q96DB5 314 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 SCRN2Q96FV2 425 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 IMP4Q96G21 291 aaKnown RBP12.41□□□□□ -0.42
SMAD3-205ENST00000558428 KLHDC7BQ96G42 594 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 LENG8Q96PV6 779 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-205ENST00000558428 KLF6Q99612 283 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-205ENST00000558428 TLR10Q9BXR5 811 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 CARD9Q9H257 536 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 GDF3Q9NR23 364 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 HS3ST3A1Q9Y663 406 aa12.41□□□□□ -0.42
SMAD3-205ENST00000558428 PCNX2A6NKB5 2137 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 A0A0J9YYE9 177 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 CFAP69A5D8W1 941 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 POM121BA6NF01 834 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 NPIPB15A6NHN6 443 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-205ENST00000558428 A6NNZ2 444 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 F5H423 210 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-205ENST00000558428 FPGTO14772 594 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 KCNN4O15554 427 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 STK10O94804 968 aaKnown RBP12.4□□□□□ -0.42
SMAD3-205ENST00000558428 MT-CYBP00156 380 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-205ENST00000558428 PRLP01236 227 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 TRBC1P01850 177 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 ALPIP09923 528 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 NFKB1P19838 968 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 NXPH1P58417 271 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 ARHGEF7Q14155 803 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 PTPRRQ15256 657 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 CNGA3Q16281 694 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 PCSK7Q16549 785 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 ZNF569Q5MCW4 686 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 DENND2CQ68D51 928 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 KYAT3Q6YP21 454 aaKnown RBP12.4□□□□□ -0.42
SMAD3-205ENST00000558428 KDELC2Q7Z4H8 507 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 ABI3BPQ7Z7G0 1075 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 SLC13A5Q86YT5 568 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-205ENST00000558428 TP53I13Q8NBR0 393 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-205ENST00000558428 OR13H1Q8NG92 308 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 SPATA22Q8NHS9 363 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 FAM174AQ8TBP5 190 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 BMFQ96LC9 184 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 MCCC1Q96RQ3 725 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-205ENST00000558428 RTKNQ9BST9 563 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 IL21RQ9HBE5 538 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 DNAAF2Q9NVR5 837 aaKnown RBP12.4□□□□□ -0.42
SMAD3-205ENST00000558428 UBP1Q9NZI7 540 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 RSPH14Q9UHP6 348 aa12.4□□□□□ -0.42
SMAD3-205ENST00000558428 TRHDEQ9UKU6 1024 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms