RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 NSUN2Q08J23 767 aaKnown RBP eCLIP12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 DMWDQ09019 674 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 CST6Q15828 149 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 LINC00114Q6XXX2 140 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 GSTA5Q7RTV2 222 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 DSG4Q86SJ6 1040 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 PRUNE1Q86TP1 453 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 ZNF567Q8N184 647 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 MDGA1Q8NFP4 955 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 KIF18AQ8NI77 898 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 CCDC110Q8TBZ0 833 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 FATE1Q969F0 183 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 MRRFQ96E11 262 aaKnown RBP12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 MRGPRX1Q96LB2 322 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 NUDCD1Q96RS6 583 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 MGME1Q9BQP7 344 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 POLR1EQ9GZS1 481 aaKnown RBP12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 RSPH9Q9H1X1 276 aaPredicted RBP12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 USP29Q9HBJ7 922 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 NOD2Q9HC29 1040 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 CD248Q9HCU0 757 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 HOMER3Q9NSC5 361 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 SARDHQ9UL12 918 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 INVSQ9Y283 1065 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 ATP8A1Q9Y2Q0 1164 aa12.14□□□□□ -0.47
HMGB1P8-201ENST00000558211 CFAP69A5D8W1 941 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 C1QTNF3-AMACRE9PGA6 284 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 ALOX15BO15296 676 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 ALBP02768 609 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 PRNPP04156 253 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 ETS1P14921 441 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 CD86P42081 329 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 FNTBP49356 437 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 BCL2L1Q07817 233 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 NIPAL4Q0D2K0 466 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 OASLQ15646 514 aaKnown RBP12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 DNTTIP2Q5QJE6 756 aaKnown RBP12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 ANKRD20A2Q5SQ80 823 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 ANKRD20A1Q5TYW2 823 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 ANKRD20A3Q5VUR7 823 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 FAM46CQ5VWP2 391 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 NCEH1Q6PIU2 408 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 GDPD4Q6W3E5 623 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 FAM124AQ86V42 546 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 CAMK1DQ8IU85 385 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 KLHL7Q8IXQ5 586 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 MAML2Q8IZL2 1156 aaPredicted RBP12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 HDDC3Q8N4P3 179 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 CAMKK1Q8N5S9 505 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 PDCD6IPQ8WUM4 868 aaKnown RBP12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 RLN3Q8WXF3 142 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 NKD2Q969F2 451 aaPredicted RBP12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 TEKT5Q96M29 485 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 DMRTB1Q96MA1 342 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 NSMCE3Q96MG7 304 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 KLHL32Q96NJ5 620 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 RBM15Q96T37 977 aaKnown RBP eCLIP12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 VAT1Q99536 393 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 OMDQ99983 421 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 FBRSQ9HAH7 460 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 GLOD4Q9HC38 313 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 CD93Q9NPY3 652 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 DYRK4Q9NR20 520 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 PRMT8Q9NR22 394 aaPredicted RBP12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 UBP1Q9NZI7 540 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 RNF14Q9UBS8 474 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 RSPH14Q9UHP6 348 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 TRHDEQ9UKU6 1024 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 PPM1HQ9ULR3 514 aa12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 DRG1Q9Y295 367 aaKnown RBP12.13□□□□□ -0.47
HMGB1P8-201ENST00000558211 A0A1W2PP55 124 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 PHF2O75151 1096 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 RNASEH2AO75792 299 aaKnown RBP12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 ITGAVP06756 1048 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 ZSCAN5DPP0CG00 497 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 CR2P20023 1033 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 STIP1P31948 543 aaKnown RBP12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 CD68P34810 354 aaPredicted RBP12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 ACTN2P35609 894 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 COILP38432 576 aaPredicted RBP12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 CSNK1DP48730 415 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 AP1S1P61966 158 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 ANGPT1Q15389 498 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 TRIP13Q15645 432 aaPredicted RBP12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 CFAP58Q5T655 872 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 TTC27Q6P3X3 843 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 DRICH1Q6PGQ1 229 aaPredicted RBP12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 CCDC137Q6PK04 289 aaKnown RBP12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 ARHGEF18Q6ZSZ5 1173 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 KDELC2Q7Z4H8 507 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 CCDC89Q8N998 374 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 TMIEQ8NEW7 156 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 ATL2Q8NHH9 583 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 SPATA22Q8NHS9 363 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 ARRDC2Q8TBH0 407 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 ARRDC3Q96B67 414 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 SPATA13Q96N96 652 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 DDX47Q9H0S4 455 aaKnown RBP12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 SUV39H2Q9H5I1 410 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms