RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 JRKO75564 520 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 OR2B3O76000 313 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PSMD4P55036 377 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MAB21L1Q13394 359 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PHTF2Q8N3S3 785 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MAFIPQ8WZ33 124 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 IFT80Q9P2H3 777 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 DNAJB9Q9UBS3 223 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PCDHGB3Q9Y5G1 929 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 TSPAN1O60635 241 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ECDO95905 644 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CD97P48960 835 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 COL9A3Q14050 684 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CDKL4Q5MAI5 379 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MUS81Q96NY9 551 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MTMR10Q9NXD2 777 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 KCTD5Q9NXV2 234 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 LTA4HP09960 611 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 FGFR1P11362 822 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 GTF2E2P29084 291 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 RFX5P48382 616 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 RACK1P63244 317 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CDKL1Q00532 357 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MED22Q15528 200 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 DPY19L3Q6ZPD9 716 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 HJURPQ8NCD3 748 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ADAM32Q8TC27 787 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ARMC5Q96C12 935 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ZBTB45Q96K62 511 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 RBAKQ9NYW8 714 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 INMT-MINDY4F8WBC2 141 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 DYRK3O43781 588 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 NPR2P20594 1047 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CD72P21854 359 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PSMA1P25786 263 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CDC42P60953 191 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 TREML1Q86YW5 311 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 RTFDC1Q9BY42 306 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 BTBD19C9JJ37 291 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 NARSO43776 548 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ACSL4O60488 711 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 FUCA1P04066 466 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ITGAVP06756 1048 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CDKN2CP42773 168 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PSMD5Q16401 504 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CERCAMQ5T4B2 595 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ANKS3Q6ZW76 656 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF615Q8N8J6 731 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 KIAA0895Q8NCT3 520 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 STOML3Q8TAV4 291 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ITCHQ96J02 903 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MAGEB10Q96LZ2 347 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PRPF19Q9UMS4 504 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ERI2A8K979 691 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 SGTAO43765 313 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 NUDT7P0C024 238 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 STAG3L1P0CL83 205 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 NOS3P29474 1203 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 GNPDA1P46926 289 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 SPP2Q13103 211 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 RNASE12Q5GAN4 147 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 FAM182AQ5T1J6 154 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MTFR1LQ9H019 292 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ACTR8Q9H981 624 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF510Q9Y2H8 683 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 GRIP1Q9Y3R0 1128 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 HMX3A6NHT5 357 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 TNFRSF11BO00300 401 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PER2O15055 1255 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF254O75437 659 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 SERPINA1P01009 418 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 RGS4P49798 205 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ERVK-25P63136 954 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 RPP38P78345 283 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 EFHBQ8N7U6 833 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 DENND1AQ8TEH3 1009 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PDE10AQ9Y233 779 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MID1O15344 667 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 GCATO75600 419 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MLYCDO95822 493 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 GPIP06744 558 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ABHD2P08910 425 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF45Q02386 682 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 CXorf57Q6NSI4 855 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 NPNTQ6UXI9 565 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 FAM20CQ8IXL6 584 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 RNF149Q8NC42 400 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 OR52J3Q8NH60 311 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ACSS3Q9H6R3 686 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ACAD9Q9H845 621 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 KCNH7Q9NS40 1196 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 PHF11Q9UIL8 331 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 TEX51A0A1B0GUA7 166 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 GNG14A0A1W2PPG7 69 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 KCNK1O00180 336 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MAD2L1Q13257 205 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 ORC2Q13416 577 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 MAPKAPK3Q16644 382 aa3.7□□□□□ -1.82
ATXN3-248ENST00000558190 AARS2Q5JTZ9 985 aaKnown RBP3.7□□□□□ -1.82
ATXN3-248ENST00000558190 SPANXN3Q5MJ09 141 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms