RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 RNASE9P60153 205 aaKnown RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 DNM1Q05193 864 aaKnown RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 LRRC63Q05C16 580 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 CDC20Q12834 499 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 MTM1Q13496 603 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 SQSTM1Q13501 440 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 HLTFQ14527 1009 aaKnown RBP eCLIP5.22□□□□□ -1.57
SPG11-208ENST00000558155 IRF4Q15306 451 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 CCDC40Q4G0X9 1142 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 CRTC2Q53ET0 693 aaPredicted RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 COBLL1Q53SF7 1204 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 ZNF658Q5TYW1 1059 aaPredicted RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 SPECC1LQ69YQ0 1117 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 TCTN3Q6NUS6 607 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 C16orf46Q6P387 395 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 ENOSF1Q7L5Y1 443 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 SLC26A9Q7LBE3 791 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 TMPRSS9Q7Z410 1059 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 KDELC2Q7Z4H8 507 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 ZDHHC17Q8IUH5 632 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 ARHGEF19Q8IW93 802 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 CCDC13Q8IYE1 715 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 SMYD4Q8IYR2 804 aaPredicted RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 ZNF683Q8IZ20 524 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 NRSN1Q8IZ57 195 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 NLGN4XQ8N0W4 816 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 WDTC1Q8N5D0 677 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 GALNT11Q8NCW6 608 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 C1orf131Q8NDD1 294 aaKnown RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 RCBTB1Q8NDN9 531 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 NLGN4YQ8NFZ3 816 aaPredicted RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 OR4D9Q8NGE8 314 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 OR56A4Q8NGH8 313 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 OR6K2Q8NGY2 324 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 ARHGEF2Q92974 986 aaKnown RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 ART4Q93070 314 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 PGAP3Q96FM1 320 aaPredicted RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 HMCESQ96FZ2 354 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 CCDC74BQ96LY2 380 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 CEP63Q96MT8 703 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 KREMEN1Q96MU8 473 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 CPXM1Q96SM3 734 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 NPY6RQ99463 290 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 SPSB2Q99619 263 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 ZPBPQ9BS86 351 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 WRAP53Q9BUR4 548 aaKnown RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 SYNCQ9H7C4 482 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 RDH14Q9HBH5 336 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 PIGVQ9NUD9 493 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 CUEDC1Q9NWM3 386 aaPredicted RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 PPARGC1AQ9UBK2 798 aaKnown RBP5.22□□□□□ -1.57
SPG11-208ENST00000558155 MOSPD1Q9UJG1 213 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 OR1A2Q9Y585 309 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 KCTD3Q9Y597 815 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 SNX10Q9Y5X0 201 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 B3GALT1Q9Y5Z6 326 aa5.22□□□□□ -1.57
SPG11-208ENST00000558155 MED13Q9UHV7 2174 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 FAM237AA0A1B0GTK4 181 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 CFAP69A5D8W1 941 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 ZSCAN5CA6NGD5 496 aaPredicted RBP5.21□□□□□ -1.58
SPG11-208ENST00000558155 B4DGG1 531 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 K7ELQ4 463 aaPredicted RBP5.21□□□□□ -1.58
SPG11-208ENST00000558155 INPP4BO15327 924 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 BUB1O43683 1085 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 KDELR3O43731 214 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 DUX1O43812 170 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 SMC2O95347 1197 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 CD160O95971 181 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 IGSF6O95976 241 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 PCCBP05166 539 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 FGF1P05230 155 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 GNLYP22749 145 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.58
SPG11-208ENST00000558155 CD1CP29017 333 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 KRT9P35527 623 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 ACVRL1P37023 503 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 STAT1P42224 750 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 ARSDP51689 593 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 RIPPLY3P57055 190 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 KIAA1024LP59773 190 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 PTK2Q05397 1052 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 ABHD18Q0P651 414 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 STIM1Q13586 685 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 RAPGEF1Q13905 1077 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 GRM3Q14832 879 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 NR1D2Q14995 579 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 AGERQ15109 404 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 SLC25A52Q3SY17 297 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 LRRC73Q5JTD7 316 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 CFAP58Q5T655 872 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 CAPRIN2Q6IMN6 1127 aaKnown RBP5.21□□□□□ -1.58
SPG11-208ENST00000558155 ERAP2Q6P179 960 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 TMEM71Q6P5X7 295 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 CEACAM20Q6UY09 585 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 FAM183BPQ6ZVS7 135 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 ASB18Q6ZVZ8 466 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 ZNF438Q7Z4V0 828 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 C17orf82Q86X59 251 aaPredicted RBP5.21□□□□□ -1.58
SPG11-208ENST00000558155 FAM129CQ86XR2 697 aa5.21□□□□□ -1.58
SPG11-208ENST00000558155 ZNF354CQ86Y25 554 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms