RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ARHGEF18Q6ZSZ5 1173 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 KLHDC8BQ8IXV7 354 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 MFSD2AQ8NA29 543 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 ATL2Q8NHH9 583 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 PDCD6IPQ8WUM4 868 aaKnown RBP13.76□□□□□ -0.21
SHMT2-234ENST00000557703 PIGKQ92643 395 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 IFT43Q96FT9 208 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 ARRDC1-AS1Q9H2J1 176 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 TRABDQ9H4I3 376 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 MAGEE1Q9HCI5 957 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 RAD18Q9NS91 495 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 HACD3Q9P035 362 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 RSPH14Q9UHP6 348 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 RAPGEFL1Q9UHV5 662 aa13.76□□□□□ -0.21
SHMT2-234ENST00000557703 EIF2B4Q9UI10 523 aaKnown RBP13.76□□□□□ -0.21
SHMT2-234ENST00000557703 LOC285095A0A1B0GVY8 99 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 TCRBV7S2A1N4TA0A589 114 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 VILLO15195 856 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 NDST3O95803 873 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 PRLP01236 227 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 PYGLP06737 847 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 HLA-DPA1P20036 260 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 SDHBP21912 280 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 CD38P28907 300 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 VIPR1P32241 457 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 CXCR5P32302 372 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 CD68P34810 354 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-234ENST00000557703 FDFT1P37268 417 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 ARHGEF7Q14155 803 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 STAT4Q14765 748 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 SIX1Q15475 284 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-234ENST00000557703 CYP1B1Q16678 543 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 ASCL5Q7RTU5 278 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 CBARPQ8N350 705 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-234ENST00000557703 C12orf50Q8NA57 414 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-234ENST00000557703 SNX19Q92543 992 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 SERAC1Q96JX3 654 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 RUNDC3BQ96NL0 473 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 ORAI3Q9BRQ5 295 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 TMEM121Q9BTD3 319 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 MLPHQ9BV36 600 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-234ENST00000557703 CAPN10Q9HC96 672 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 SEMA4GQ9NTN9 838 aa13.75□□□□□ -0.21
SHMT2-234ENST00000557703 R3HDM2Q9Y2K5 976 aaKnown RBP13.75□□□□□ -0.21
SHMT2-234ENST00000557703 TNRC6BQ9UPQ9 1833 aaKnown RBP13.74□□□□□ -0.21
SHMT2-234ENST00000557703 FRYLO94915 3013 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 AP3B1O00203 1094 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 PLK4O00444 970 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 PPFIA2O75334 1257 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 ELFN1P0C7U0 828 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 NFKB1P19838 968 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 PAFAH1B1P43034 410 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 FNTAP49354 379 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 FAM193AP78312 1265 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 ARHGAP8P85298 464 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 LPAL2Q16609 132 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 ZDHHC20Q5W0Z9 365 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 LIPIQ6XZB0 460 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 LINC00523Q86TU6 105 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 NRSN1Q8IZ57 195 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 OXR1Q8N573 874 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 CCDC89Q8N998 374 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 FAM71DQ8N9W8 422 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 TMEM145Q8NBT3 493 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 CCHCR1Q8TD31 782 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 GRK7Q8WTQ7 553 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 RMDN1Q96DB5 314 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 NSMCE3Q96MG7 304 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 TRIB3Q96RU7 358 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 WDR24Q96S15 920 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 RBM15Q96T37 977 aaKnown RBP eCLIP13.74□□□□□ -0.21
SHMT2-234ENST00000557703 HINFPQ9BQA5 517 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 FSD1LQ9BXM9 530 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 ERVMER34-1Q9H9K5 563 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 ARNT2Q9HBZ2 717 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 TM9SF3Q9HD45 589 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.74□□□□□ -0.21
SHMT2-234ENST00000557703 PAK5Q9P286 719 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 ZFR2Q9UPR6 939 aaKnown RBP13.74□□□□□ -0.21
SHMT2-234ENST00000557703 CHKBQ9Y259 395 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 CABIN1Q9Y6J0 2220 aa13.74□□□□□ -0.21
SHMT2-234ENST00000557703 IGLON5A6NGN9 336 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 CAPN8A6NHC0 703 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 FPGTO14772 594 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 SPINT1O43278 529 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 HEXIM1O94992 359 aaKnown RBP13.73□□□□□ -0.21
SHMT2-234ENST00000557703 FGF1P05230 155 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 PDHA1P08559 390 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 TGM1P22735 817 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 TEAD1P28347 426 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 RABIFP47224 123 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 LIG3P49916 1009 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 WNT3AP56704 352 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 YPEL5P62699 121 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 PPP2CBP62714 309 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 PPP2CAP67775 309 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 CDK16Q00536 496 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 PDE1BQ01064 536 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 TUBB2AQ13885 445 aa13.73□□□□□ -0.21
SHMT2-234ENST00000557703 LRRC14Q15048 493 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms