RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 HTR1BP28222 390 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 PEX5P50542 639 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 MAZP56270 477 aaKnown RBP14.17□□□□□ -0.14
SLIRP-210ENST00000557431 OGDHQ02218 1023 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 CA9Q16790 459 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 CLEC16AQ2KHT3 1053 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 INO80DQ53TQ3 878 aaPredicted RBP14.17□□□□□ -0.14
SLIRP-210ENST00000557431 CFAP58Q5T655 872 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 PHF19Q5T6S3 580 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 DNAAF5Q86Y56 855 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 TSEN2Q8NCE0 465 aaKnown RBP14.17□□□□□ -0.14
SLIRP-210ENST00000557431 FAM46DQ8NEK8 389 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 USP7Q93009 1102 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 PMEPA1Q969W9 287 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 RBM15Q96T37 977 aaKnown RBP eCLIP14.17□□□□□ -0.14
SLIRP-210ENST00000557431 FAM117AQ9C073 453 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 SEMA6CQ9H3T2 930 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 RDH14Q9HBH5 336 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 CYP4F12Q9HCS2 524 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 ATP8A1Q9Y2Q0 1164 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 PCDHGA7Q9Y5G6 932 aa14.17□□□□□ -0.14
SLIRP-210ENST00000557431 NAV2Q8IVL1 2488 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 ARHGAP6O43182 974 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 RECQL5O94762 991 aaPredicted RBP14.16□□□□□ -0.14
SLIRP-210ENST00000557431 LIPCP11150 499 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 ERCC5P28715 1186 aaPredicted RBP14.16□□□□□ -0.14
SLIRP-210ENST00000557431 CCKBRP32239 447 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 MLLT3P42568 568 aaPredicted RBP14.16□□□□□ -0.14
SLIRP-210ENST00000557431 NSFP46459 744 aaKnown RBP14.16□□□□□ -0.14
SLIRP-210ENST00000557431 TPI1P60174 286 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 MTM1Q13496 603 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 C16orf72Q14CZ0 275 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 KRT31Q15323 416 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 MANEAQ5SRI9 462 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 SMYD5Q6GMV2 418 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 LVRNQ6Q4G3 990 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 MON1BQ7L1V2 547 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 SPRED1Q7Z699 444 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 TP53INP2Q8IXH6 220 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 C3orf20Q8ND61 904 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 RCBTB1Q8NDN9 531 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 PTCD2Q8WV60 388 aaKnown RBP14.16□□□□□ -0.14
SLIRP-210ENST00000557431 PATE1Q8WXA2 126 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 HTR3CQ8WXA8 447 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 CASKIN2Q8WXE0 1202 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 SGF29Q96ES7 293 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 TMEM74Q96NL1 305 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 ARHGAP9Q9BRR9 750 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 SLC39A8Q9C0K1 460 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 DPEP2Q9H4A9 486 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 TMEM51Q9NW97 253 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 LRIT1Q9P2V4 623 aa14.16□□□□□ -0.14
SLIRP-210ENST00000557431 HEMK1Q9Y5R4 338 aaPredicted RBP14.16□□□□□ -0.14
SLIRP-210ENST00000557431 TCRBV5S1A1TA0A578 114 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 TMEM110-MUSTN1A8MSY1 372 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 C9orf172C9J069 976 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 TOR1BO14657 336 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 TEX33O43247 280 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 ATMINO43313 823 aaPredicted RBP14.15□□□□□ -0.14
SLIRP-210ENST00000557431 ITGB6P18564 788 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 PAPOLAP51003 745 aaKnown RBP14.15□□□□□ -0.14
SLIRP-210ENST00000557431 OR1D5P58170 312 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 YBEYP58557 167 aaPredicted RBP14.15□□□□□ -0.14
SLIRP-210ENST00000557431 EIF3IQ13347 325 aaKnown RBP14.15□□□□□ -0.14
SLIRP-210ENST00000557431 PTPRRQ15256 657 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 AMZ1Q400G9 498 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 PARP15Q460N3 678 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 MAP9Q49MG5 647 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 C14orf28Q4W4Y0 310 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 CERCAMQ5T4B2 595 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 DENND2CQ68D51 928 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 SPECC1LQ69YQ0 1117 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 ERAP2Q6P179 960 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 DNAJC24Q6P3W2 148 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 LIPIQ6XZB0 460 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 SRLQ86TD4 932 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 UMODL1-AS1Q8N2C9 162 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 PAF1Q8N7H5 531 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 OR56A4Q8NGH8 313 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 RETREG1Q9H6L5 497 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 LRRC19Q9H756 370 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 CATSPERBQ9H7T0 1116 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 SIK3Q9Y2K2 1263 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 PCDHGA4Q9Y5G9 962 aa14.15□□□□□ -0.14
SLIRP-210ENST00000557431 HECTD1Q9ULT8 2610 aa14.14□□□□□ -0.15
SLIRP-210ENST00000557431 A0A0U1RQS6 177 aa14.14□□□□□ -0.15
SLIRP-210ENST00000557431 SIGLEC16A6NMB1 481 aa14.14□□□□□ -0.15
SLIRP-210ENST00000557431 WASH4PA8MWX3 477 aa14.14□□□□□ -0.15
SLIRP-210ENST00000557431 CACNB4O00305 520 aaPredicted RBP14.14□□□□□ -0.15
SLIRP-210ENST00000557431 B4GAT1O43505 415 aa14.14□□□□□ -0.15
SLIRP-210ENST00000557431 PRAMEF11O60813 436 aa14.14□□□□□ -0.15
SLIRP-210ENST00000557431 CALB1P05937 261 aa14.14□□□□□ -0.15
SLIRP-210ENST00000557431 ELFN1P0C7U0 828 aa14.14□□□□□ -0.15
SLIRP-210ENST00000557431 CCL4P13236 92 aa14.14□□□□□ -0.15
SLIRP-210ENST00000557431 GLB1P16278 677 aa14.14□□□□□ -0.15
SLIRP-210ENST00000557431 EEF1GP26641 437 aaKnown RBP14.14□□□□□ -0.15
SLIRP-210ENST00000557431 AK4P27144 223 aaPredicted RBP14.14□□□□□ -0.15
SLIRP-210ENST00000557431 STAT1P42224 750 aa14.14□□□□□ -0.15
SLIRP-210ENST00000557431 GSCP56915 257 aaPredicted RBP14.14□□□□□ -0.15
SLIRP-210ENST00000557431 KIAA1024LP59773 190 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms