RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 RXRGP48443 463 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 LIG3P49916 1009 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 CLDN2P57739 230 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 RPL26P61254 145 aaKnown RBP12.55□□□□□ -0.4
SLIRP-209ENST00000557342 FOXK2Q01167 660 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 XRCC4Q13426 336 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 LRRC14Q15048 493 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 TEX44Q53QW1 395 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 DBX2Q6ZNG2 339 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 Q6ZSR6 202 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 USP45Q70EL2 814 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 SPATS2Q86XZ4 545 aaKnown RBP12.55□□□□□ -0.4
SLIRP-209ENST00000557342 NAXDQ8IW45 347 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 DEFB124Q8NES8 71 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 OR13H1Q8NG92 308 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 ARRDC2Q8TBH0 407 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 CENPTQ96BT3 561 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 IFT43Q96FT9 208 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 SCRN2Q96FV2 425 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 VAT1Q99536 393 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 FERMT1Q9BQL6 677 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 HEMGNQ9BXL5 484 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 KCTD5Q9NXV2 234 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 SEPT10Q9P0V9 454 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 SAE1Q9UBE0 346 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-209ENST00000557342 DNPEPQ9ULA0 475 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 GUCA1BQ9UMX6 200 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 RPL26L1Q9UNX3 145 aaKnown RBP12.55□□□□□ -0.4
SLIRP-209ENST00000557342 PPIL1Q9Y3C6 166 aa12.55□□□□□ -0.4
SLIRP-209ENST00000557342 COL5A1P20908 1838 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-209ENST00000557342 POM121BA6NF01 834 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 PCNX2A6NKB5 2137 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 SH3BP5O60239 455 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 FZD6O60353 706 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 ZNF189O75820 626 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-209ENST00000557342 FTCDO95954 541 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 PRKCGP05129 697 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 PTMAP06454 111 aaKnown RBP12.54□□□□□ -0.4
SLIRP-209ENST00000557342 ITGAVP06756 1048 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 KCNA4P22459 653 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 EPHB1P54762 984 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 YPEL5P62699 121 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 CCZ1BP86790 482 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 CCZ1P86791 482 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-209ENST00000557342 ADCY2Q08462 1091 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 NIPAL4Q0D2K0 466 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 RALGDSQ12967 914 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 ZBTB17Q13105 803 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 ARHGEF7Q14155 803 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 PTK2BQ14289 1009 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 NOMO1Q15155 1222 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 SLC14A2Q15849 920 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 PSAPL1Q6NUJ1 521 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 LIPIQ6XZB0 460 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 ZC3H18Q86VM9 953 aaKnown RBP12.54□□□□□ -0.4
SLIRP-209ENST00000557342 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.54□□□□□ -0.4
SLIRP-209ENST00000557342 CNTD1Q8N815 330 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 TP53I13Q8NBR0 393 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-209ENST00000557342 SETD7Q8WTS6 366 aaKnown RBP12.54□□□□□ -0.4
SLIRP-209ENST00000557342 PIH1D2Q8WWB5 315 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 ALG3Q92685 438 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 HES6Q96HZ4 224 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 AGAP3Q96P47 875 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 ALS2CR12Q96Q35 445 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 TDRD1Q9BXT4 1180 aaKnown RBP12.54□□□□□ -0.4
SLIRP-209ENST00000557342 PCDH9Q9HC56 1237 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 GPR27Q9NS67 375 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 B4GALT6Q9UBX8 382 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 COQ6Q9Y2Z9 468 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 CAPN6Q9Y6Q1 641 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 DMXL1Q9Y485 3027 aa12.54□□□□□ -0.4
SLIRP-209ENST00000557342 LAMA1P25391 3075 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 GOLGA6L9A6NEM1 432 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 H7C0C1 242 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 PSMD11O00231 422 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 DDX3YO15523 660 aaKnown RBP12.53□□□□□ -0.4
SLIRP-209ENST00000557342 PYGMP11217 842 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 PTPN3P26045 913 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 IGFALSP35858 605 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 CD86P42081 329 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 GRK6P43250 576 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 ATP5OP48047 213 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 THOP1P52888 689 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 PFN3P60673 137 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 SKOR1P84550 965 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 IL9RQ01113 521 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 SEMG2Q02383 582 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 IRF4Q15306 451 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 PRAMEF14Q5SWL7 426 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 SLC22A18ASQ8N1D0 253 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 TTC13Q8NBP0 860 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 RHBDD1Q8TEB9 315 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 HAUS1Q96CS2 278 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 IMP4Q96G21 291 aaKnown RBP12.53□□□□□ -0.4
SLIRP-209ENST00000557342 TEKT5Q96M29 485 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 QKIQ96PU8 341 aaKnown RBP eCLIP12.53□□□□□ -0.4
SLIRP-209ENST00000557342 MCCC1Q96RQ3 725 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-209ENST00000557342 CDC6Q99741 560 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 ADGRE3Q9BY15 652 aa12.53□□□□□ -0.4
SLIRP-209ENST00000557342 SLC25A51Q9H1U9 297 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms