RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 OR5B17Q8NGF7 314 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 RASSF8Q8NHQ8 419 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 UHMK1Q8TAS1 419 aaKnown RBP5.04□□□□□ -1.6
ATXN3-247ENST00000557311 NOC3LQ8WTT2 800 aaKnown RBP5.04□□□□□ -1.6
ATXN3-247ENST00000557311 KCNE4Q8WWG9 221 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 LARP4BQ92615 738 aaKnown RBP5.04□□□□□ -1.6
ATXN3-247ENST00000557311 GOLGA1Q92805 767 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 JAKMIP2Q96AA8 810 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 DACT3Q96B18 629 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-247ENST00000557311 ZBTB8AQ96BR9 441 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 VMP1Q96GC9 406 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 NAF1Q96HR8 494 aaKnown RBP5.04□□□□□ -1.6
ATXN3-247ENST00000557311 PIWIL1Q96J94 861 aaKnown RBP5.04□□□□□ -1.6
ATXN3-247ENST00000557311 DEPDC7Q96QD5 511 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 RUFY1Q96T51 708 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 ORAI3Q9BRQ5 295 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 MED10Q9BTT4 135 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 JAM3Q9BX67 310 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 SLC2A11Q9BYW1 496 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 DCLK3Q9C098 648 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 CIPCQ9C0C6 399 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 IKZF4Q9H2S9 585 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 DPEP3Q9H4B8 488 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 EPB41L1Q9H4G0 881 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 ERVMER34-1Q9H9K5 563 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 CPNE5Q9HCH3 593 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 KIAA1586Q9HCI6 787 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 DMAP1Q9NPF5 467 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-247ENST00000557311 GDF3Q9NR23 364 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 GPR27Q9NS67 375 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 HOMER3Q9NSC5 361 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 ZNHIT6Q9NWK9 470 aaKnown RBP5.04□□□□□ -1.6
ATXN3-247ENST00000557311 ZNF446Q9NWS9 450 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 TRMT1Q9NXH9 659 aaKnown RBP5.04□□□□□ -1.6
ATXN3-247ENST00000557311 UBAP1Q9NZ09 502 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 SEL1LQ9UBV2 794 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.04□□□□□ -1.6
ATXN3-247ENST00000557311 TMCC3Q9ULS5 477 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 MYO6Q9UM54 1294 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 PLA2G4CQ9UP65 541 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 LIMCH1Q9UPQ0 1083 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 NCKAP1Q9Y2A7 1128 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 NME7Q9Y5B8 376 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 PCDHB4Q9Y5E5 795 aa5.04□□□□□ -1.6
ATXN3-247ENST00000557311 HEMK1Q9Y5R4 338 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-247ENST00000557311 TLR4O00206 839 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 KRIT1O00522 736 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 MAFKO60675 156 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 MTA2O94776 668 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 GCNT3O95395 438 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 KLKB1P03952 638 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 DNTTP04053 509 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 IGHV4-34P06331 123 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 INHBBP09529 407 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 RARGP13631 454 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 ACP1P24666 158 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 CD38P28907 300 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 EPHA8P29322 1005 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-247ENST00000557311 GCKP35557 465 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 STAT5AP42229 794 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 PGFP49763 221 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 TNNC1P63316 161 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 COG7P83436 770 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 WASHC5Q12768 1159 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 TRPC3Q13507 836 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 ALCAMQ13740 583 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 IQCB1Q15051 598 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 SEPT7Q16181 437 aaKnown RBP5.03□□□□□ -1.6
ATXN3-247ENST00000557311 SLC45A4Q5BKX6 768 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 KIAA0895LQ68EN5 471 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 USP30Q70CQ3 517 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 TADA2BQ86TJ2 420 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 MTDHQ86UE4 582 aaKnown RBP5.03□□□□□ -1.6
ATXN3-247ENST00000557311 STK32CQ86UX6 486 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 SFR1Q86XK3 245 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 CACUL1Q86Y37 369 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 WDR49Q8IV35 697 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 PEX5LQ8IYB4 626 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 ZNF276Q8N554 614 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 IQUBQ8NA54 791 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 ATP11CQ8NB49 1132 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 GABPB2Q8TAK5 448 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-247ENST00000557311 SMARCD1Q96GM5 515 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 PDLIM2Q96JY6 352 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 TNIP3Q96KP6 325 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 C20orf173Q96LM9 149 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 SH3GL1Q99961 368 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 CBWD1Q9BRT8 395 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 SLC39A3Q9BRY0 314 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 TMEM245Q9H330 911 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 PCIF1Q9H4Z3 704 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 CSNK1G1Q9HCP0 422 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 TBC1D7Q9P0N9 293 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 SCML1Q9UN30 329 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 SCML2Q9UQR0 700 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 X6R8D5 127 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 TRIP11Q15643 1979 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 SPTA1P02549 2419 aa5.03□□□□□ -1.6
ATXN3-247ENST00000557311 GOLGA4Q13439 2230 aaKnown RBP5.03□□□□□ -1.6
ATXN3-247ENST00000557311 hCG_2014768A0A024R1R8 64 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms