RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 MAPK13O15264 365 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 ZG16O60844 167 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 PPP6R2O75170 966 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 CREG1O75629 220 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 NR2F2P24468 414 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 RNASE9P60153 205 aaKnown RBP12.57□□□□□ -0.4
PSEN1-220ENST00000557037 YWHAZP63104 245 aaKnown RBP12.57□□□□□ -0.4
PSEN1-220ENST00000557037 ARF5P84085 180 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 CDK17Q00537 523 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 CDK18Q07002 472 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 LRMPQ12912 555 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 CNGA2Q16280 664 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 C5orf22Q49AR2 442 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 TMEM270Q6UE05 265 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 C6orf15Q6UXA7 325 aaPredicted RBP12.57□□□□□ -0.4
PSEN1-220ENST00000557037 BEND5Q7L4P6 421 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 GRAMD1CQ8IYS0 662 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 IQUBQ8NA54 791 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 FUBP1Q96AE4 644 aaKnown RBP12.57□□□□□ -0.4
PSEN1-220ENST00000557037 VOPP1Q96AW1 172 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 ULBP3Q9BZM4 244 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 ATP13A1Q9HD20 1204 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 MLXIPLQ9NP71 852 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 MPP6Q9NZW5 540 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 TAAR2Q9P1P5 351 aa12.57□□□□□ -0.4
PSEN1-220ENST00000557037 PCDHGA9Q9Y5G4 932 aaKnown RBP12.57□□□□□ -0.4
PSEN1-220ENST00000557037 MAP1AP78559 2803 aaPredicted RBP12.56□□□□□ -0.4
PSEN1-220ENST00000557037 ZSCAN5CA6NGD5 496 aaPredicted RBP12.56□□□□□ -0.4
PSEN1-220ENST00000557037 ARGFXA6NJG6 315 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 CACNB4O00305 520 aaPredicted RBP12.56□□□□□ -0.4
PSEN1-220ENST00000557037 LRRTM2O43300 516 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 CALUO43852 315 aaPredicted RBP12.56□□□□□ -0.4
PSEN1-220ENST00000557037 DPM1O60762 260 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 NFKBIAP25963 317 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 AK4P27144 223 aaPredicted RBP12.56□□□□□ -0.4
PSEN1-220ENST00000557037 CASP14P31944 242 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 GTF2H1P32780 548 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 YWHAEP62258 255 aaKnown RBP12.56□□□□□ -0.4
PSEN1-220ENST00000557037 NME3Q13232 169 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 SQSTM1Q13501 440 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 MAP7Q14244 749 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 ATXN7L2Q5T6C5 722 aaPredicted RBP12.56□□□□□ -0.4
PSEN1-220ENST00000557037 SPNS3Q6ZMD2 512 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 SETD3Q86TU7 594 aaPredicted RBP12.56□□□□□ -0.4
PSEN1-220ENST00000557037 SLC47A2Q86VL8 602 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 NRROSQ86YC3 692 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 RBMXL3Q8N7X1 1067 aaKnown RBP12.56□□□□□ -0.4
PSEN1-220ENST00000557037 UBR7Q8N806 425 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 NANOS1Q8WY41 292 aaKnown RBP12.56□□□□□ -0.4
PSEN1-220ENST00000557037 PNPLA2Q96AD5 504 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 DPYSL5Q9BPU6 564 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 TRIM62Q9BVG3 475 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 ACSS2Q9NR19 701 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 PDP2Q9P2J9 529 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 ZNF451Q9Y4E5 1061 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 PCDHB4Q9Y5E5 795 aa12.56□□□□□ -0.4
PSEN1-220ENST00000557037 HEATR9A2RTY3 570 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 RNF225M0QZC1 329 aaPredicted RBP12.55□□□□□ -0.4
PSEN1-220ENST00000557037 NADKO95544 446 aaPredicted RBP12.55□□□□□ -0.4
PSEN1-220ENST00000557037 PAEPP09466 180 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 CCNB1P14635 433 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 OR1E1P30953 314 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 ITGA1P56199 1179 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 PER3P56645 1201 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 KIAA1024LP59773 190 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 SLC20A2Q08357 652 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 MTM1Q13496 603 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 DNASE1L3Q13609 305 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 SLC39A14Q15043 492 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 CHRNA6Q15825 494 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 MYLK3Q32MK0 819 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 TMEM52BQ4KMG9 183 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 PAPD7Q5XG87 772 aaKnown RBP12.55□□□□□ -0.4
PSEN1-220ENST00000557037 SLC30A9Q6PML9 568 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 GDPD4Q6W3E5 623 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 LEKR1Q6ZMV7 388 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 LYSMD3Q7Z3D4 306 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 ARHGAP22Q7Z5H3 698 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 DEFB106AQ8N104 65 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 STAMBPL1Q96FJ0 436 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 AHCYL2Q96HN2 611 aaKnown RBP12.55□□□□□ -0.4
PSEN1-220ENST00000557037 TMX3Q96JJ7 454 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 USP28Q96RU2 1077 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 CARS2Q9HA77 564 aaKnown RBP12.55□□□□□ -0.4
PSEN1-220ENST00000557037 KLHL3Q9UH77 587 aa12.55□□□□□ -0.4
PSEN1-220ENST00000557037 E5RJQ4 531 aa12.54□□□□□ -0.4
PSEN1-220ENST00000557037 KLRC4O43908 158 aa12.54□□□□□ -0.4
PSEN1-220ENST00000557037 POP4O95707 220 aaKnown RBP12.54□□□□□ -0.4
PSEN1-220ENST00000557037 CD160O95971 181 aa12.54□□□□□ -0.4
PSEN1-220ENST00000557037 XPAP23025 273 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-220ENST00000557037 HNRNPH3P31942 346 aaKnown RBP12.54□□□□□ -0.4
PSEN1-220ENST00000557037 PSMC2P35998 433 aaKnown RBP12.54□□□□□ -0.4
PSEN1-220ENST00000557037 RPL34P49207 117 aaKnown RBP12.54□□□□□ -0.4
PSEN1-220ENST00000557037 FOXM1Q08050 763 aa12.54□□□□□ -0.4
PSEN1-220ENST00000557037 PLEKHN1Q494U1 663 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-220ENST00000557037 ZGRF1Q86YA3 2104 aa12.54□□□□□ -0.4
PSEN1-220ENST00000557037 ZNF683Q8IZ20 524 aa12.54□□□□□ -0.4
PSEN1-220ENST00000557037 NAGSQ8N159 534 aa12.54□□□□□ -0.4
PSEN1-220ENST00000557037 CT55Q8WUE5 264 aa12.54□□□□□ -0.4
PSEN1-220ENST00000557037 LGR4Q9BXB1 951 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms