RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 EMBQ6PCB8 327 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 FBXO38Q6PIJ6 1188 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 PARS2Q7L3T8 475 aaKnown RBP16.53■□□□□ 0.24
PCNX4-213ENST00000556907 PID1Q7Z2X4 250 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 TTC7BQ86TV6 843 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 CAMK1DQ8IU85 385 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 OR14C36Q8NHC7 312 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 ARRDC2Q8TBH0 407 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 HNRNPLLQ8WVV9 542 aaKnown RBP16.53■□□□□ 0.24
PCNX4-213ENST00000556907 IMP4Q96G21 291 aaKnown RBP16.53■□□□□ 0.24
PCNX4-213ENST00000556907 AGAP3Q96P47 875 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 GORASP1Q9BQQ3 440 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 GPR174Q9BXC1 333 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 ETNK1Q9HBU6 452 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 GLOD4Q9HC38 313 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 VPS45Q9NRW7 570 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 SERGEFQ9UGK8 458 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 ANAPC5Q9UJX4 755 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 RPL26L1Q9UNX3 145 aaKnown RBP16.53■□□□□ 0.24
PCNX4-213ENST00000556907 TTLL3Q9Y4R7 772 aa16.53■□□□□ 0.24
PCNX4-213ENST00000556907 METTL12A8MUP2 240 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 TSPAN6O43657 245 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 PIGNO95427 931 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 LMNAP02545 664 aaKnown RBP16.52■□□□□ 0.24
PCNX4-213ENST00000556907 BCKDHBP21953 392 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 CCR5P51681 352 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 PLTPP55058 493 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 NHLH1Q02575 133 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 SRSF5Q13243 272 aaKnown RBP16.52■□□□□ 0.24
PCNX4-213ENST00000556907 UGP2Q16851 508 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 ARMC12Q5T9G4 340 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 FAXCQ5TGI0 409 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 LAIR1Q6GTX8 287 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 ERAP2Q6P179 960 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 PRR23BQ6ZRT6 265 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 FAM124AQ86V42 546 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 ZCCHC9Q8N567 271 aaKnown RBP16.52■□□□□ 0.24
PCNX4-213ENST00000556907 FAM160A2Q8N612 972 aaPredicted RBP16.52■□□□□ 0.24
PCNX4-213ENST00000556907 PAF1Q8N7H5 531 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 CAVIN3Q969G5 261 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 FEM1CQ96JP0 617 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 FCRL5Q96RD9 977 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 CD93Q9NPY3 652 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 PHTF1Q9UMS5 762 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 INVSQ9Y283 1065 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 PCDHGA5Q9Y5G8 931 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 RAI2Q9Y5P3 530 aa16.52■□□□□ 0.24
PCNX4-213ENST00000556907 THADAQ6YHU6 1953 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 ABCA7Q8IZY2 2146 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 TBC1D3DA0A087WVF3 549 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 TBC1D3IA0A087WXS9 549 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 TBC1D3EA0A087X179 549 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 TBC1D3KA0A087X1G2 549 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 TBC1D3FA6NER0 549 aaPredicted RBP16.51■□□□□ 0.23
PCNX4-213ENST00000556907 ERI2A8K979 691 aaKnown RBP16.51■□□□□ 0.23
PCNX4-213ENST00000556907 UPK3BL1B0FP48 263 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 TBC1D3LB9A6J9 549 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 UPK3BL2E5RIL1 263 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 TBC1D3HP0C7X1 549 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 TIMP2P16035 220 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 HOXD12P35452 270 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 METAP1P53582 386 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 CDK16Q00536 496 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 DSC2Q02487 901 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 POM121L1PQ3SYA9 428 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 WDR45BQ5MNZ6 344 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 ANKRD22Q5VYY1 191 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 KIAA0895LQ68EN5 471 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 TBC1D3GQ6DHY5 549 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 TBC1D3CQ6IPX1 549 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 KIAA1161Q6NSJ0 714 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 PPP1R21Q6ZMI0 780 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 CEP128Q6ZU80 1094 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 TRIM69Q86WT6 500 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 TBC1D3Q8IZP1 549 aaPredicted RBP16.51■□□□□ 0.23
PCNX4-213ENST00000556907 FRMD1Q8N878 549 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 SUMF1Q8NBK3 374 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 FRMD8Q9BZ67 464 aaPredicted RBP16.51■□□□□ 0.23
PCNX4-213ENST00000556907 SMG5Q9UPR3 1016 aaKnown RBP16.51■□□□□ 0.23
PCNX4-213ENST00000556907 PCDHGC4Q9Y5F7 938 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 FADS3Q9Y5Q0 445 aa16.51■□□□□ 0.23
PCNX4-213ENST00000556907 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 GOLGA6CA6NDK9 693 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 GOLGA6BA6NDN3 693 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 C10orf142B7Z368 130 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 AREL1O15033 823 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 FZD6O60353 706 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 PPFIA2O75334 1257 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 ANXA9O76027 345 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 PGLSO95336 258 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 EPOP01588 193 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 GOLGA6DP0CG33 693 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 TAS2R38P59533 333 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 NIPAL4Q0D2K0 466 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 CBLBQ13191 982 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 PRPSAP1Q14558 356 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 LYSMD4Q5XG99 296 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 KCTD11Q693B1 232 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 RABEPKQ7Z6M1 372 aa16.5■□□□□ 0.23
PCNX4-213ENST00000556907 PRPF39Q86UA1 669 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms