RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 SLC18A2Q05940 514 aa13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 KDSRQ06136 332 aa13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 PTPRNQ16849 979 aa13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 ZNF470Q6ECI4 717 aa13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 CES5AQ6NT32 575 aa13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 NEPROQ6NW34 567 aa13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 TAX1BP1Q86VP1 789 aa13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 MFSD6LQ8IWD5 586 aa13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 PTPRN2Q92932 1015 aa13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 EID2BQ96D98 161 aa13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 FBXO6Q9NRD1 293 aaPredicted RBP13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 SENP1Q9P0U3 644 aa13.88□□□□□ -0.19
EFCAB11-212ENST00000556639 CCDC162PA2VCL2 907 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 HAUS5O94927 633 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 PGLSO95336 258 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 LAMP2P13473 410 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 SERPINB9P50453 376 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 CCNHP51946 323 aaPredicted RBP13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 BCL2L1Q07817 233 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 THOC5Q13769 683 aaKnown RBP13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 GRM3Q14832 879 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 MYLK3Q32MK0 819 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 LRRC73Q5JTD7 316 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 GRTP1Q5TC63 336 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 LGSNQ5TDP6 509 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 GLT6D1Q7Z4J2 308 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 AHI1Q8N157 1196 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 OR4K2Q8NGD2 314 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 ERLEC1Q96DZ1 483 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 CHFRQ96EP1 664 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 ZDHHC6Q9H6R6 413 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 FNDC3AQ9Y2H6 1198 aaKnown RBP13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 COL4A3Q01955 1670 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 PAPSS2O95340 614 aaPredicted RBP13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 GOT2P00505 430 aaKnown RBP13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 SAT1P21673 171 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 PDE1BQ01064 536 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 NAB1Q13506 487 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 SEMA3AQ14563 771 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 ARMC12Q5T9G4 340 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 ZNF449Q6P9G9 518 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 OR2A12Q8NGT7 310 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 VPS39Q96JC1 886 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 ADGRE3Q9BY15 652 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 SLC2A11Q9BYW1 496 aa13.87□□□□□ -0.19
EFCAB11-212ENST00000556639 WDR91A4D1P6 747 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 GOLGA8CPA6NN73 597 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 HTRA2O43464 458 aaPredicted RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 NFATC1O95644 943 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 ASMTLO95671 621 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 ZNF140P52738 457 aaPredicted RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 LIMK2P53671 638 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 EPHB1P54762 984 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 SNRPD1P62314 119 aaKnown RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 FCHO2Q0JRZ9 810 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 SF3A3Q12874 501 aaKnown RBP eCLIP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 PDE1CQ14123 709 aaPredicted RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 CARD16Q5EG05 197 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 CNSTQ6PJW8 725 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 LVRNQ6Q4G3 990 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 ZC3HC1Q86WB0 502 aaKnown RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 CNTN4Q8IWV2 1026 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 NDUFAF2Q8N183 169 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 GRIN3AQ8TCU5 1115 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 FRS2Q8WU20 508 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 MSLNLQ96KJ4 702 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 FAM107BQ9H098 131 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 ZNF358Q9NW07 568 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 NKIRAS1Q9NYS0 192 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 FBXO5Q9UKT4 447 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 H3BQ06 376 aaPredicted RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 GPR39O43194 453 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 PAMP19021 973 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 FOXN2P32314 431 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 SPRP35270 261 aaPredicted RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 CSNK1DP48730 415 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 CDKN1CP49918 316 aaPredicted RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 NEK3P51956 506 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 PRAMEP78395 509 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 ACVR1Q04771 509 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 C16orf46Q6P387 395 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 TIFABQ6ZNK6 161 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 LYSMD3Q7Z3D4 306 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 TTC30BQ8N4P2 665 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 OTUD6BQ8N6M0 293 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 PAF1Q8N7H5 531 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 C2CD4AQ8NCU7 369 aaPredicted RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 DYDC1Q8WWB3 177 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 CENPTQ96BT3 561 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 MTBPQ96DY7 904 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 CDKN2AIPNLQ96HQ2 116 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 APOPT1Q96IL0 206 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 FAM111AQ96PZ2 611 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 SRPK1Q96SB4 655 aaKnown RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 SNX15Q9NRS6 342 aa13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 POLR3BQ9NW08 1133 aaPredicted RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 SMG5Q9UPR3 1016 aaKnown RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 COLQQ9Y215 455 aaPredicted RBP13.86□□□□□ -0.19
EFCAB11-212ENST00000556639 SOX1O00570 391 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms