RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 GOLGA5Q8TBA6 731 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 SSC4DQ8WTU2 575 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 TMEM174Q8WUU8 243 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 ERCC4Q92889 916 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-236ENST00000556220 PLPPR2Q96GM1 343 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 TMX3Q96JJ7 454 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 FCRL2Q96LA5 508 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-236ENST00000556220 TBATAQ96M53 351 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 CATSPER2Q96P56 530 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 CMKLR1Q99788 373 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 IMPG2Q9BZV3 1241 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 LRRN3Q9H3W5 708 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 CNGB3Q9NQW8 809 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 KBTBD4Q9NVX7 518 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 CLIC4Q9Y696 253 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 MTORP42345 2549 aa6.99□□□□□ -1.29
ATXN3-236ENST00000556220 ZNF503-AS2A6NEH8 195 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 STMND1H3BQB6 276 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 RAD51BO15315 384 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 CTSLP07711 333 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 KRT7P08729 469 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 PDGFRAP16234 1089 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 TNFRSF8P28908 595 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 CHRNA3P32297 505 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 NUMBP49757 651 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 MAPK10P53779 464 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 RAD23BP54727 409 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 MLLT10P55197 1068 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 DAOAP59103 153 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 PFN3P60673 137 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 RPS21P63220 83 aaKnown RBP6.98□□□□□ -1.29
ATXN3-236ENST00000556220 AMPD3Q01432 767 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 KLRB1Q12918 225 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 RABEP1Q15276 862 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 TPRG1LQ5T0D9 272 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 C1orf220Q5T0J3 134 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 ERN2Q76MJ5 926 aaKnown RBP6.98□□□□□ -1.29
ATXN3-236ENST00000556220 HID1Q8IV36 788 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 LGI2Q8N0V4 545 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 SIX6OS1Q8N1H7 587 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 SDR16C5Q8N3Y7 309 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 MFSD4AQ8N468 514 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 TTC39CQ8N584 583 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 PDILTQ8N807 584 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 ARL10Q8N8L6 244 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 TMIEQ8NEW7 156 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 TAS1R2Q8TE23 839 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 JPH3Q8WXH2 748 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-236ENST00000556220 KCTD13Q8WZ19 329 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 NKD1Q969G9 470 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 SLC39A13Q96H72 371 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 FAXDC2Q96IV6 333 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 FEM1CQ96JP0 617 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 LENG8Q96PV6 779 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-236ENST00000556220 PPP1R9BQ96SB3 815 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 C7orf25Q9BPX7 421 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 HDAC8Q9BY41 377 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 CPEB1Q9BZB8 566 aaKnown RBP6.98□□□□□ -1.29
ATXN3-236ENST00000556220 CLPBQ9H078 707 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 CDH19Q9H159 772 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 TCEAL2Q9H3H9 227 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-236ENST00000556220 DYRK4Q9NR20 520 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 SEMA3GQ9NS98 782 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 GULP1Q9UBP9 304 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 APOBEC3BQ9UH17 382 aaKnown RBP6.98□□□□□ -1.29
ATXN3-236ENST00000556220 AKAP9Q99996 3911 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 TRPM6Q9BX84 2022 aa6.98□□□□□ -1.29
ATXN3-236ENST00000556220 A1L4Q6 167 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 ZNF891A8MT65 544 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-236ENST00000556220 AGRPO00253 132 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 KPNA3O00505 521 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-236ENST00000556220 FPGTO14772 594 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 EIF5BO60841 1220 aaKnown RBP6.97□□□□□ -1.29
ATXN3-236ENST00000556220 SEMA7AO75326 666 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 VPS4BO75351 444 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 RNF224P0DH78 156 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 LCP1P13796 627 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 TSHRP16473 764 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 TACR2P21452 398 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 DCTP40126 519 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 UQCRFS1P47985 274 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 ETF1P62495 437 aaKnown RBP6.97□□□□□ -1.29
ATXN3-236ENST00000556220 RPS26P62854 115 aaKnown RBP6.97□□□□□ -1.29
ATXN3-236ENST00000556220 NUCB2P80303 420 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 BST2Q10589 180 aaKnown RBP6.97□□□□□ -1.29
ATXN3-236ENST00000556220 GOLGA7BQ2TAP0 167 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 LRRK1Q38SD2 2015 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 LACTB2Q53H82 288 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-236ENST00000556220 TMCO4Q5TGY1 634 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 CAPRIN2Q6IMN6 1127 aaKnown RBP6.97□□□□□ -1.29
ATXN3-236ENST00000556220 KIAA1161Q6NSJ0 714 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 LVRNQ6Q4G3 990 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 UNC13DQ70J99 1090 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 PHACTR4Q8IZ21 702 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 RBFAQ8N0V3 343 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 SH2D3CQ8N5H7 860 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 OR6C4Q8NGE1 309 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 IRGQQ8WZA9 623 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 GAL3ST3Q96A11 431 aa6.97□□□□□ -1.29
ATXN3-236ENST00000556220 ALG14Q96F25 216 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms