RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 UNC5CO95185 931 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 NDST3O95803 873 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 HGFP14210 728 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 TPH1P17752 444 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 VARSP26640 1264 aaKnown RBP10.76□□□□□ -0.69
ACTN1-216ENST00000556083 PRDX6P30041 224 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 SLC26A9Q7LBE3 791 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 RASAL3Q86YV0 1011 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 PHF10Q8WUB8 498 aaKnown RBP10.76□□□□□ -0.69
ACTN1-216ENST00000556083 KCTD13Q8WZ19 329 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 PLD4Q96BZ4 506 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 SHCBP1LQ9BZQ2 653 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 GLOD4Q9HC38 313 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 KIF20BQ96Q89 1820 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 FAM86C2PA6NEL3 165 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 TPP1O14773 563 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 TBL1XO60907 577 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 NR2F1P10589 423 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 NDST2P52849 883 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 DPY19L1Q2PZI1 675 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 RAP1GAP2Q684P5 730 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 DUPD1Q68J44 220 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 NAIF1Q69YI7 327 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-216ENST00000556083 PHYKPLQ8IUZ5 450 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 NKD2Q969F2 451 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-216ENST00000556083 MIEF2Q96C03 454 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 HAVCR1Q96D42 359 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 ACBD6Q9BR61 282 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 RHOBTB2Q9BYZ6 727 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 LRMDAQ9H2I8 198 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 RNPEPL1Q9HAU8 725 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 SOHLH2Q9NX45 425 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 NUDT4Q9NZJ9 180 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 CCDC167Q9P0B6 97 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 DEC1Q9P2X7 70 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 ATG13O75143 517 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 RPP40O75818 363 aaKnown RBP10.76□□□□□ -0.69
ACTN1-216ENST00000556083 HSMCR30P0CW71 290 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 IDSP22304 550 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 MYL9P24844 172 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 PSME3P61289 254 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 PFKFB4Q16877 469 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 VPS26BQ4G0F5 336 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 DGKKQ5KSL6 1271 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 BEND5Q7L4P6 421 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 RGL4Q8IZJ4 473 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 KLHL23Q8NBE8 558 aa10.76□□□□□ -0.69
ACTN1-216ENST00000556083 REXO5Q96IC2 774 aaKnown RBP10.76□□□□□ -0.69
ACTN1-216ENST00000556083 GPN3Q9UHW5 284 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-216ENST00000556083 COL3A1P02461 1466 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-216ENST00000556083 ITGA2BP08514 1039 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 SNHG28P0DPA3 235 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 CAPGP40121 348 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 NAGLUP54802 743 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 CDH8P55286 799 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 HSPA14Q0VDF9 509 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 PWP1Q13610 501 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 CHPFQ8IZ52 775 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 DCAKDQ8WVC6 231 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 HAS1Q92839 578 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 MYO19Q96H55 970 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 TPD52L3Q96J77 140 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 FEM1CQ96JP0 617 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 TMEM109Q9BVC6 243 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 SENP6Q9GZR1 1112 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-216ENST00000556083 IL25Q9H293 177 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 PNPLA3Q9NST1 481 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 C1orf232A0A0U1RR37 186 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 CCDC162PA2VCL2 907 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 MTRF1O75570 445 aaKnown RBP10.75□□□□□ -0.69
ACTN1-216ENST00000556083 PSMG1O95456 288 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 ELFN1P0C7U0 828 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 TM4SF1P30408 202 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 L1CAMP32004 1257 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 ADRA1BP35368 520 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 CCNFP41002 786 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 FMO1Q01740 532 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 PPIDQ08752 370 aaKnown RBP10.75□□□□□ -0.69
ACTN1-216ENST00000556083 NOMO1Q15155 1222 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 TEX44Q53QW1 395 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 BICRALQ6AI39 1079 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 OAFQ86UD1 273 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 TEX47Q8TBZ9 253 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 BRD9Q9H8M2 597 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 EIF2B3Q9NR50 452 aaKnown RBP10.75□□□□□ -0.69
ACTN1-216ENST00000556083 COMMD9Q9P000 198 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 BTBD3Q9Y2F9 522 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 C15orf41Q9Y2V0 281 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 COX4I1P13073 169 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 MMP8P22894 467 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 DNAJB1P25685 340 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 IL12AP29459 219 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 PBX3P40426 434 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 CRATP43155 626 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 CXCR3P49682 368 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 HADHBP55084 474 aaKnown RBP10.75□□□□□ -0.69
ACTN1-216ENST00000556083 CDH4P55283 916 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 MTAPQ13126 283 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 CBX2Q14781 532 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-216ENST00000556083 CCDC80Q76M96 950 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms