RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 VPS36Q86VN1 386 aa10.91□□□□□ -0.66
TDP1-212ENST00000555565 SLC35F3Q8IY50 421 aa10.91□□□□□ -0.66
TDP1-212ENST00000555565 CELF6Q96J87 481 aaKnown RBP10.91□□□□□ -0.66
TDP1-212ENST00000555565 EXOC2Q96KP1 924 aa10.91□□□□□ -0.66
TDP1-212ENST00000555565 PEBP4Q96S96 227 aa10.91□□□□□ -0.66
TDP1-212ENST00000555565 SNRNP25Q9BV90 132 aaKnown RBP10.91□□□□□ -0.66
TDP1-212ENST00000555565 CPEB1Q9BZB8 566 aaKnown RBP10.91□□□□□ -0.66
TDP1-212ENST00000555565 NAT10Q9H0A0 1025 aaKnown RBP10.91□□□□□ -0.66
TDP1-212ENST00000555565 EPN3Q9H201 632 aa10.91□□□□□ -0.66
TDP1-212ENST00000555565 TCEAL2Q9H3H9 227 aaPredicted RBP10.91□□□□□ -0.66
TDP1-212ENST00000555565 HAUS4Q9H6D7 363 aa10.91□□□□□ -0.66
TDP1-212ENST00000555565 PDFQ9HBH1 243 aa10.91□□□□□ -0.66
TDP1-212ENST00000555565 AIPL1Q9NZN9 384 aa10.91□□□□□ -0.66
TDP1-212ENST00000555565 DKK3Q9UBP4 350 aa10.91□□□□□ -0.66
TDP1-212ENST00000555565 IPO11Q9UI26 975 aaKnown RBP10.91□□□□□ -0.66
TDP1-212ENST00000555565 RABGEF1Q9UJ41 708 aa10.91□□□□□ -0.66
TDP1-212ENST00000555565 AP4E1Q9UPM8 1137 aa10.91□□□□□ -0.66
TDP1-212ENST00000555565 ANKRD36A6QL64 1941 aa10.91□□□□□ -0.66
TDP1-212ENST00000555565 NBASA2RRP1 2371 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 A0A1W2PQC6 194 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 H3BM21 787 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 DDX3XO00571 662 aaKnown RBP eCLIP10.9□□□□□ -0.665e-8■■□□□ 12.6
TDP1-212ENST00000555565 NVLO15381 856 aaKnown RBP10.9□□□□□ -0.66
TDP1-212ENST00000555565 PRAMEF11O60813 436 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 PPFIA2O75334 1257 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 TM7SF2O76062 418 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 PIGNO95427 931 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 FTLP02792 175 aaPredicted RBP10.9□□□□□ -0.66
TDP1-212ENST00000555565 LIPCP11150 499 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 HGFP14210 728 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 JUNDP17535 347 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 DESP17661 470 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 NDST2P52849 883 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 ASIC2Q16515 512 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 KLHL40Q2TBA0 621 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 C4orf17Q53FE4 359 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 ERMARDQ5T6L9 678 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 PPP1R2P3Q6NXS1 205 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 DTX1Q86Y01 620 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 RBFAQ8N0V3 343 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 FBXO39Q8N4B4 442 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 TP53I13Q8NBR0 393 aaPredicted RBP10.9□□□□□ -0.66
TDP1-212ENST00000555565 LMX1AQ8TE12 382 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 CXorf40AQ8TE69 158 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 NAP1L5Q96NT1 182 aaPredicted RBP10.9□□□□□ -0.66
TDP1-212ENST00000555565 KCTD15Q96SI1 283 aaPredicted RBP10.9□□□□□ -0.66
TDP1-212ENST00000555565 CCDC3Q9BQI4 270 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 WRAP53Q9BUR4 548 aaKnown RBP10.9□□□□□ -0.66
TDP1-212ENST00000555565 SLC39A8Q9C0K1 460 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 DHX35Q9H5Z1 703 aaKnown RBP10.9□□□□□ -0.66
TDP1-212ENST00000555565 MBNL1Q9NR56 388 aaKnown RBP10.9□□□□□ -0.66
TDP1-212ENST00000555565 UBA2Q9UBT2 640 aaPredicted RBP10.9□□□□□ -0.66
TDP1-212ENST00000555565 SEPT3Q9UH03 358 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 PCSK1NQ9UHG2 260 aa10.9□□□□□ -0.66
TDP1-212ENST00000555565 TEP1Q99973 2627 aaKnown RBP10.89□□□□□ -0.67
TDP1-212ENST00000555565 A0A1B0GTH6 734 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 A0A1W2PQM1 296 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 TSPAN11A1L157 253 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 SMTNL1A8MU46 457 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 EIF3CLB5ME19 914 aaKnown RBP10.89□□□□□ -0.67
TDP1-212ENST00000555565 EEF2KO00418 725 aaKnown RBP10.89□□□□□ -0.67
TDP1-212ENST00000555565 BUB1BO60566 1050 aaPredicted RBP10.89□□□□□ -0.67
TDP1-212ENST00000555565 GZMAP12544 262 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 ERCC2P18074 760 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 MIPP30301 263 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 PRKCIP41743 596 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 RGRP47804 291 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 ZNF165P49910 485 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 PAPOLAP51003 745 aaKnown RBP10.89□□□□□ -0.67
TDP1-212ENST00000555565 SUOXP51687 545 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 THOP1P52888 689 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 YPEL5P62699 121 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 EIF3IQ13347 325 aaKnown RBP10.89□□□□□ -0.67
TDP1-212ENST00000555565 SPIDRQ14159 915 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 UGP2Q16851 508 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 SKIDA1Q1XH10 827 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 TMEM52BQ4KMG9 183 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 FILIP1LQ4L180 1135 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 AFMIDQ63HM1 303 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 RFX8Q6ZV50 586 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 RAB11FIP2Q7L804 512 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 VASH2Q86V25 355 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 ZSWIM9Q86XI8 627 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 PTRH1Q86Y79 214 aaKnown RBP10.89□□□□□ -0.67
TDP1-212ENST00000555565 ARHGAP12Q8IWW6 846 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 PHACTR4Q8IZ21 702 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 NPWQ8N729 165 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 TSEN2Q8NCE0 465 aaKnown RBP10.89□□□□□ -0.67
TDP1-212ENST00000555565 WDR48Q8TAF3 677 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 ZNF564Q8TBZ8 553 aaPredicted RBP10.89□□□□□ -0.67
TDP1-212ENST00000555565 HCAR2Q8TDS4 363 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 FNIP1Q8TF40 1166 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 EIF3CQ99613 913 aaKnown RBP10.89□□□□□ -0.67
TDP1-212ENST00000555565 IL12RB2Q99665 862 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 NCAPGQ9BPX3 1015 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 C1QTNF7Q9BXJ2 289 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 CLPBQ9H078 707 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 SUV39H2Q9H5I1 410 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 PCDH12Q9NPG4 1184 aa10.89□□□□□ -0.67
TDP1-212ENST00000555565 DONSONQ9NYP3 566 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms