RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 FAM90A7PA6NKC0 464 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 FAM90A22PA8MWA6 464 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 FAM90A12PA8MX19 464 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 FAM90A23PA8MXZ1 464 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 HNRNPCL3B7ZW38 293 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 ANP32CO43423 234 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 HNRNPCL1O60812 293 aaKnown RBP3.56□□□□□ -1.84
SNX6-204ENST00000555541 CNPP09543 421 aaKnown RBP3.56□□□□□ -1.84
SNX6-204ENST00000555541 WEE2P0C1S8 567 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 HNRNPCL4P0DMR1 293 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 ITGAXP20702 1163 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 PIGAP37287 484 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 BLKP51451 505 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 TNFAIP1Q13829 316 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 SYT16Q17RD7 645 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 TMEM30BQ3MIR4 351 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 PAPPA-AS1Q5QFB9 102 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 HERC6Q8IVU3 1022 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 CNOT9Q92600 299 aaKnown RBP3.56□□□□□ -1.84
SNX6-204ENST00000555541 OTULINQ96BN8 352 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.56□□□□□ -1.84
SNX6-204ENST00000555541 RBM4Q9BWF3 364 aaKnown RBP3.56□□□□□ -1.84
SNX6-204ENST00000555541 CYSLTR2Q9NS75 346 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 KCNS2Q9ULS6 477 aa3.56□□□□□ -1.84
SNX6-204ENST00000555541 A0A1W2PS18 150 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 TYW5A2RUC4 315 aaKnown RBP3.55□□□□□ -1.84
SNX6-204ENST00000555541 VWA3AA6NCI4 1184 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 FAM72CH0Y354 149 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 C16orf97H3BN30 126 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 PEX12O00623 359 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 PER2O15055 1255 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 ZNF500O60304 480 aaPredicted RBP3.55□□□□□ -1.84
SNX6-204ENST00000555541 ATP2C2O75185 946 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 NDUFS7O75251 213 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 RGS11O94810 467 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 SRCP12931 536 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 HLA-DOBP13765 273 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 ZNF8P17098 575 aaPredicted RBP3.55□□□□□ -1.84
SNX6-204ENST00000555541 GRK6P43250 576 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 SLC20A2Q08357 652 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 ANKRD1Q15327 319 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 KRTAP13-3Q3SY46 172 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 AMZ1Q400G9 498 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 ESCO2Q56NI9 601 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 FAM72AQ5TYM5 149 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 ARHGAP17Q68EM7 881 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 FAM72DQ6L9T8 149 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 C17orf99Q6UX52 265 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 SLC26A9Q7LBE3 791 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 ZC3HC1Q86WB0 502 aaKnown RBP3.55□□□□□ -1.84
SNX6-204ENST00000555541 FAM72BQ86X60 149 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 LURAP1LQ8IV03 231 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 SUGP1Q8IWZ8 645 aaKnown RBP3.55□□□□□ -1.84
SNX6-204ENST00000555541 CPXM2Q8N436 756 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 USP38Q8NB14 1042 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 OR13A1Q8NGR1 328 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 TAS1R2Q8TE23 839 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 LITAFQ99732 161 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 EPHX3Q9H6B9 360 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 NOD2Q9HC29 1040 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 C1RLQ9NZP8 487 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 PCDHGB5Q9Y5G0 923 aa3.55□□□□□ -1.84
SNX6-204ENST00000555541 CACNA1FO60840 1977 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 A0A0U1RQF3 1178 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 ARHGAP10A1A4S6 786 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 SH2D7A6NKC9 451 aaPredicted RBP3.54□□□□□ -1.84
SNX6-204ENST00000555541 HSPB2A8KAH6 182 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 KLRF2D3W0D1 207 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 CEP104O60308 925 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 ATP1A1P05023 1023 aaKnown RBP3.54□□□□□ -1.84
SNX6-204ENST00000555541 PTPN2P17706 415 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 TRAPPC10P48553 1259 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 NOVP48745 357 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 HDAC4P56524 1084 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 TAF5Q15542 800 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 HSPB2Q16082 182 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 SOWAHAQ2M3V2 549 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 EDRF1Q3B7T1 1238 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 ANKRD45Q5TZF3 282 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 ANO1Q5XXA6 986 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 CES5AQ6NT32 575 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 MOB3CQ70IA8 216 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 SFR1Q86XK3 245 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 C2CD5Q86YS7 1000 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 MAPK1IP1LQ8NDC0 245 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 FAM76AQ8TAV0 307 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 SNAPC3Q92966 411 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 MROH8Q9H579 483 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 SLC32A1Q9H598 525 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 VDAC3Q9Y277 283 aa3.54□□□□□ -1.84
SNX6-204ENST00000555541 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 PABPN1LA6NDY0 278 aaKnown RBP3.53□□□□□ -1.84
SNX6-204ENST00000555541 IRAK2O43187 625 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 KLK10O43240 276 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 ZIC3O60481 467 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 RFPL2O75678 378 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 NDUFB4O95168 129 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 CETPP11597 493 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 KRT5P13647 590 aa3.53□□□□□ -1.84
SNX6-204ENST00000555541 PAPOLAP51003 745 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms