RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 DPEP2Q9H4A9 486 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 SUDS3Q9H7L9 328 aaPredicted RBP13.2□□□□□ -0.3
XRCC3-212ENST00000555231 RDH14Q9HBH5 336 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 DGKBQ9Y6T7 804 aa13.2□□□□□ -0.3
XRCC3-212ENST00000555231 TLN1Q9Y490 2541 aaKnown RBP13.19□□□□□ -0.3
XRCC3-212ENST00000555231 BOD1L1Q8NFC6 3051 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 TSPAN11A1L157 253 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 F8VZ95 297 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 B4GAT1O43505 415 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 CREB3O43889 395 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 BUB1BO60566 1050 aaPredicted RBP13.19□□□□□ -0.3
XRCC3-212ENST00000555231 PPFIA2O75334 1257 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 GFPT2O94808 682 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 CYP1A1P04798 512 aaPredicted RBP13.19□□□□□ -0.3
XRCC3-212ENST00000555231 CCL4P13236 92 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 CHRNB2P17787 502 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 MMP8P22894 467 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 RFC1P35251 1148 aaPredicted RBP13.19□□□□□ -0.3
XRCC3-212ENST00000555231 MMP12P39900 470 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 SUOXP51687 545 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 FMO1Q01740 532 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 SERINC3Q13530 473 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 HLTFQ14527 1009 aaKnown RBP eCLIP13.19□□□□□ -0.3
XRCC3-212ENST00000555231 AMZ1Q400G9 498 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 MAP9Q49MG5 647 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 CFAP58Q5T655 872 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 SPECC1LQ69YQ0 1117 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 ERAP2Q6P179 960 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 SCYL2Q6P3W7 929 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 SLFN11Q7Z7L1 901 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 DTX1Q86Y01 620 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 PTRH1Q86Y79 214 aaKnown RBP13.19□□□□□ -0.3
XRCC3-212ENST00000555231 CAMK1DQ8IU85 385 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 FAM114A1Q8IWE2 563 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 OR56A4Q8NGH8 313 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 CENPIQ92674 756 aaPredicted RBP13.19□□□□□ -0.3
XRCC3-212ENST00000555231 NTAN1Q96AB6 310 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 SEMA3CQ99985 751 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 FUCA2Q9BTY2 467 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 CYP4F12Q9HCS2 524 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 UBA2Q9UBT2 640 aaPredicted RBP13.19□□□□□ -0.3
XRCC3-212ENST00000555231 NOCTQ9UK39 431 aaKnown RBP13.19□□□□□ -0.3
XRCC3-212ENST00000555231 ATP8A1Q9Y2Q0 1164 aa13.19□□□□□ -0.3
XRCC3-212ENST00000555231 A0A1W2PQC6 194 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 A8MX80 341 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 J3KR12 359 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 CACNB4O00305 520 aaPredicted RBP13.18□□□□□ -0.3
XRCC3-212ENST00000555231 RECQL5O94762 991 aaPredicted RBP13.18□□□□□ -0.3
XRCC3-212ENST00000555231 SFTPCP11686 197 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 GPD1P21695 349 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 RGRP47804 291 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 MAZP56270 477 aaKnown RBP13.18□□□□□ -0.3
XRCC3-212ENST00000555231 OR1D5P58170 312 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 YBEYP58557 167 aaPredicted RBP13.18□□□□□ -0.3
XRCC3-212ENST00000555231 KIAA1024LP59773 190 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 B4GALNT1Q00973 533 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 TLE1Q04724 770 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 RALGDSQ12967 914 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 AGERQ15109 404 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 EFHC2Q5JST6 749 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 WDR59Q6PJI9 974 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 DNAAF5Q86Y56 855 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 PELI3Q8N2H9 469 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 RCBTB1Q8NDN9 531 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 HCAR2Q8TDS4 363 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 PMEPA1Q969W9 287 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 TMEM159Q96B96 161 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 LGR4Q9BXB1 951 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 STK33Q9BYT3 514 aa13.18□□□□□ -0.3
XRCC3-212ENST00000555231 UBR5O95071 2799 aaPredicted RBP13.17□□□□□ -0.3
XRCC3-212ENST00000555231 TEX33O43247 280 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 CCP110O43303 1012 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 KRT3P12035 628 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 PNLIPP16233 465 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 CDR2Q01850 454 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 PTP4A2Q12974 167 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 PARP15Q460N3 678 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 BRAT1Q6PJG6 821 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 ZNF574Q6ZN55 896 aaPredicted RBP13.17□□□□□ -0.3
XRCC3-212ENST00000555231 ZNF677Q86XU0 584 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 PAF1Q8N7H5 531 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 CELF6Q96J87 481 aaKnown RBP13.17□□□□□ -0.3
XRCC3-212ENST00000555231 PCDHB18PQ96TA0 734 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 NUDT22Q9BRQ3 303 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 SELENOOQ9BVL4 669 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 SLC25A18Q9H1K4 315 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 PDFQ9HBH1 243 aa13.17□□□□□ -0.3
XRCC3-212ENST00000555231 SPATS2LQ9NUQ6 558 aaKnown RBP13.17□□□□□ -0.3
XRCC3-212ENST00000555231 GEMIN8Q9NWZ8 242 aaKnown RBP13.17□□□□□ -0.3
XRCC3-212ENST00000555231 NUDT21O43809 227 aaKnown RBP13.16□□□□□ -0.3
XRCC3-212ENST00000555231 CPNE6O95741 557 aa13.16□□□□□ -0.3
XRCC3-212ENST00000555231 GM2AP17900 193 aa13.16□□□□□ -0.3
XRCC3-212ENST00000555231 KELP23276 732 aa13.16□□□□□ -0.3
XRCC3-212ENST00000555231 CD82P27701 267 aa13.16□□□□□ -0.3
XRCC3-212ENST00000555231 ALDH4A1P30038 563 aa13.16□□□□□ -0.3
XRCC3-212ENST00000555231 KLK7P49862 253 aa13.16□□□□□ -0.3
XRCC3-212ENST00000555231 ARSDP51689 593 aa13.16□□□□□ -0.3
XRCC3-212ENST00000555231 BECN1Q14457 450 aa13.16□□□□□ -0.3
XRCC3-212ENST00000555231 GRM3Q14832 879 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms