RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 F2RL1P55085 397 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 CDH8P55286 799 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 SELENOVP59797 346 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 ST3GAL1Q11201 340 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 KRT24Q2M2I5 525 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 PLEKHS1Q5SXH7 462 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 C16orf54Q6UWD8 224 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 LINGO2Q7L985 606 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 SZRD1Q7Z422 152 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 SRBD1Q8N5C6 995 aaKnown RBP5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 RPL36ALQ969Q0 106 aaKnown RBP5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 ARHGEF26Q96DR7 871 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 CCDC34Q96HJ3 373 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 PGAM5Q96HS1 289 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 VCPIP1Q96JH7 1222 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 NLRP4Q96MN2 994 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 CATSPERBQ9H7T0 1116 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 CYSLTR2Q9NS75 346 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 SIRT3Q9NTG7 399 aaPredicted RBP5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 TMEM5Q9Y2B1 443 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 SESN1Q9Y6P5 492 aa5.59□□□□□ -1.51
CKS1BP1-201ENST00000555221 IGLV5-39A0A0G2JS06 123 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 FAM237AA0A1B0GTK4 181 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 hCG_1807616A0A1W2PRN6 198 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 TIMM44O43615 452 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 RGS11O94810 467 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 SYF2O95926 243 aaKnown RBP5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 TMEM191BP0C7N4 346 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 PORP16435 677 aaPredicted RBP5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 ZNF182P17025 639 aaPredicted RBP5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 FBLP22087 321 aaKnown RBP5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 MCM3P25205 808 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 UBA7P41226 1012 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 ZP1P60852 638 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 EPS8Q12929 822 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 PTGR1Q14914 329 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 WASHC2DQ5SRD0 308 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 GKAP1Q5VSY0 366 aaPredicted RBP5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 DCAF12L2Q5VW00 463 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 GLDNQ6ZMI3 551 aaPredicted RBP5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 CHST9Q7L1S5 443 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 NOXA1Q86UR1 476 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 MB21D2Q8IYB1 491 aaPredicted RBP5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 TEX11Q8IYF3 940 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 HUS1BQ8NHY5 278 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 INPP5DQ92835 1189 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 CALML4Q96GE6 196 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 FEM1CQ96JP0 617 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 ZNF570Q96NI8 536 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 FAM110AQ9BQ89 295 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 TMEM47Q9BQJ4 181 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 MSTO1Q9BUK6 570 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 POLDIP3Q9BY77 421 aaKnown RBP5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 TKTL2Q9H0I9 626 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 ISCUQ9H1K1 167 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 KRCC1Q9NPI7 259 aaPredicted RBP5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 RAI2Q9Y5P3 530 aa5.58□□□□□ -1.52
CKS1BP1-201ENST00000555221 MS4A18H0YCH9 400 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 HCRTR2O43614 444 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 AHCYL1O43865 530 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 NKX2-2O95096 273 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 ARSBP15848 533 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 TMEM11P17152 192 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 GPTP24298 496 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 GARSP41250 739 aaKnown RBP5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 RAD52P43351 418 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 ENTPD1P49961 510 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 SNX16P57768 344 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 C21orf58P58505 322 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 TFAP4Q01664 338 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 NUCB1Q02818 461 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 GPR18Q14330 331 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 SGO1Q5FBB7 561 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 CXorf66Q5JRM2 361 aaPredicted RBP5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 CFAP58Q5T655 872 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 NUGGCQ68CJ6 796 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 SLC35F3Q8IY50 421 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 TAGAPQ8N103 731 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 TMEM199Q8N511 208 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 ZBTB2Q8N680 514 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 SCCPDHQ8NBX0 429 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 HARBI1Q96MB7 349 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 IFIH1Q9BYX4 1025 aaKnown RBP5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 PDZD7Q9H5P4 517 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 RANGRFQ9HD47 186 aaPredicted RBP5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 CLIC5Q9NZA1 410 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 ERVK-11Q9UQG0 969 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 NFE2L3Q9Y4A8 694 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 CEPT1Q9Y6K0 416 aa5.57□□□□□ -1.52
CKS1BP1-201ENST00000555221 TMEM202A6NGA9 273 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 B4DLN1 442 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 TMCC2O75069 709 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 RB1P06400 928 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 CLTBP09497 229 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 GNLYP22749 145 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 ACTN2P35609 894 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 ABCG1P45844 678 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 ADORA2A-AS1P86434 159 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 ZBED6P86452 979 aa5.56□□□□□ -1.52
CKS1BP1-201ENST00000555221 SORDQ00796 357 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms