RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 HDAC10Q969S8 669 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 NSL1Q96IY1 281 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 CCT7Q99832 543 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 TRNAU1APQ9NX07 287 aaKnown RBP16.66■□□□□ 0.26
PCNX1-209ENST00000554879 MTRRQ9UBK8 725 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 CLDN11O75508 207 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 ASLP04424 464 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 TSHRP16473 764 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 CHRM3P20309 590 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 CDK18Q07002 472 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 TPGS2Q68CL5 300 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 MRNIPQ6NTE8 343 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 CENPTQ96BT3 561 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 OXCT2Q9BYC2 517 aaPredicted RBP16.66■□□□□ 0.26
PCNX1-209ENST00000554879 ACSS2Q9NR19 701 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.66■□□□□ 0.26
PCNX1-209ENST00000554879 DCDC2Q9UHG0 476 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 APOBEC2Q9Y235 224 aaKnown RBP16.66■□□□□ 0.26
PCNX1-209ENST00000554879 PKP3Q9Y446 797 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 INSL5Q9Y5Q6 135 aa16.66■□□□□ 0.26
PCNX1-209ENST00000554879 A0A0D9SEW6 157 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 PER2O15055 1255 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 GLP2RO95838 553 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 HNRNPDQ14103 355 aaKnown RBP16.65■□□□□ 0.26
PCNX1-209ENST00000554879 GLT6D1Q7Z4J2 308 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 SLC41A1Q8IVJ1 513 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 ZNF317Q96PQ6 595 aaPredicted RBP16.65■□□□□ 0.26
PCNX1-209ENST00000554879 TUBA8Q9NY65 449 aaPredicted RBP16.65■□□□□ 0.26
PCNX1-209ENST00000554879 AGO1Q9UL18 857 aaKnown RBP16.65■□□□□ 0.26
PCNX1-209ENST00000554879 SATB2Q9UPW6 733 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 INSL6Q9Y581 213 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 CFLARO15519 480 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 CNTFP26441 200 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 NEK2P51955 445 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 SLC22A17Q8WUG5 538 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 PYDC1Q8WXC3 89 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 GPAMQ9HCL2 828 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 PAK6Q9NQU5 681 aaPredicted RBP16.65■□□□□ 0.26
PCNX1-209ENST00000554879 MRPS23Q9Y3D9 190 aaKnown RBP16.65■□□□□ 0.26
PCNX1-209ENST00000554879 RHOBTB1O94844 696 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 GFAPP14136 432 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 CPA3P15088 417 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 PARP15Q460N3 678 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 TUBB6Q9BUF5 446 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 PCDHB9Q9Y5E1 797 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 ZNF487B1APH4 448 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 MPP2Q14168 576 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 TRIM16LQ309B1 348 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 TOP1MTQ969P6 601 aa16.65■□□□□ 0.26
PCNX1-209ENST00000554879 SEC24AO95486 1093 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 TIMP1P01033 207 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 PRKCGP05129 697 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 CTPS1P17812 591 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 YBEYP58557 167 aaPredicted RBP16.64■□□□□ 0.25
PCNX1-209ENST00000554879 WDR5P61964 334 aaKnown RBP16.64■□□□□ 0.25
PCNX1-209ENST00000554879 HPCAP84074 193 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 OXNAD1Q96HP4 312 aaPredicted RBP16.64■□□□□ 0.25
PCNX1-209ENST00000554879 RPL10LQ96L21 214 aaKnown RBP16.64■□□□□ 0.25
PCNX1-209ENST00000554879 CAAP1Q9H8G2 361 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 INPPL1O15357 1258 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 PLK1P53350 603 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 WDR4P57081 412 aaKnown RBP16.64■□□□□ 0.25
PCNX1-209ENST00000554879 RPS6KA2Q15349 733 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 POM121L1PQ3SYA9 428 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 OTUD1Q5VV17 481 aaPredicted RBP16.64■□□□□ 0.25
PCNX1-209ENST00000554879 DENND6AQ8IWF6 608 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 DCAKDQ8WVC6 231 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 TOX2Q96NM4 488 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 CLSTN3Q9BQT9 956 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 C2orf49Q9BVC5 232 aaPredicted RBP16.64■□□□□ 0.25
PCNX1-209ENST00000554879 ADGRE3Q9BY15 652 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 SLC25A51Q9H1U9 297 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 TBX10O75333 385 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 SEC24DO94855 1032 aaPredicted RBP16.64■□□□□ 0.25
PCNX1-209ENST00000554879 CRTAMO95727 393 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 NDST2P52849 883 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 DLG2Q15700 870 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 PKN3Q6P5Z2 889 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 HJURPQ8NCD3 748 aaPredicted RBP16.64■□□□□ 0.25
PCNX1-209ENST00000554879 BCL7CQ8WUZ0 217 aaPredicted RBP16.64■□□□□ 0.25
PCNX1-209ENST00000554879 PGAP3Q96FM1 320 aaPredicted RBP16.64■□□□□ 0.25
PCNX1-209ENST00000554879 COQ7Q99807 217 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 PRKD2Q9BZL6 878 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 NDUFA13Q9P0J0 144 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 FBXO5Q9UKT4 447 aa16.64■□□□□ 0.25
PCNX1-209ENST00000554879 A0A1B0GVM2 712 aa16.63■□□□□ 0.25
PCNX1-209ENST00000554879 FAM95CA0A1B0GW59 222 aa16.63■□□□□ 0.25
PCNX1-209ENST00000554879 ZNF840PA6NDX5 716 aa16.63■□□□□ 0.25
PCNX1-209ENST00000554879 TCAF2A6NFQ2 919 aa16.63■□□□□ 0.25
PCNX1-209ENST00000554879 SNAP91O60641 907 aa16.63■□□□□ 0.25
PCNX1-209ENST00000554879 XYLBO75191 536 aa16.63■□□□□ 0.25
PCNX1-209ENST00000554879 TOP3BO95985 862 aaKnown RBP16.63■□□□□ 0.25
PCNX1-209ENST00000554879 RALBP11234 206 aa16.63■□□□□ 0.25
PCNX1-209ENST00000554879 MPP1Q00013 466 aa16.63■□□□□ 0.25
PCNX1-209ENST00000554879 ATXN2LQ8WWM7 1075 aaKnown RBP16.63■□□□□ 0.25
PCNX1-209ENST00000554879 SNX15Q9NRS6 342 aa16.63■□□□□ 0.25
PCNX1-209ENST00000554879 CENPFP49454 3210 aa16.63■□□□□ 0.25
PCNX1-209ENST00000554879 A0A0J9YVX5 310 aa16.63■□□□□ 0.25
PCNX1-209ENST00000554879 SRP72O76094 671 aaKnown RBP16.63■□□□□ 0.25
PCNX1-209ENST00000554879 TFPTP0C1Z6 253 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms