RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 USP12O75317 370 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 RECQL5O94762 991 aaPredicted RBP12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 MAP3K6O95382 1288 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 MPOP05164 745 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 ELFN1P0C7U0 828 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 ITPKBP27987 946 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 HTR1BP28222 390 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 EIF2S3P41091 472 aaKnown RBP12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 CSNK1DP48730 415 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 SUOXP51687 545 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 SRP54P61011 504 aaKnown RBP12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 YPEL5P62699 121 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 POLR2LP62875 67 aaKnown RBP12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 CCDC173Q0VFZ6 552 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 RFTN1Q14699 578 aaPredicted RBP12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 DPYSL2Q16555 572 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 HADHQ16836 314 aaKnown RBP12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 ZCCHC8Q6NZY4 707 aaKnown RBP12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 MACC1Q6ZN28 852 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 LRRC69Q6ZNQ3 347 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 BBS5Q8N3I7 341 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 ATPAF2Q8N5M1 289 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 KCTD6Q8NC69 237 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 ZNF564Q8TBZ8 553 aaPredicted RBP12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 HCAR2Q8TDS4 363 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 GLMNQ92990 594 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 CRELD1Q96HD1 420 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 NSMCE3Q96MG7 304 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 LRRC61Q9BV99 259 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 CLPBQ9H078 707 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 DEF6Q9H4E7 631 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 PCDH18Q9HCL0 1135 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 NT5MQ9NPB1 228 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 GPR27Q9NS67 375 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 UVRAGQ9P2Y5 699 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 KLQ9UEF7 1012 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 REXO2Q9Y3B8 237 aaKnown RBP12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 TTLL3Q9Y4R7 772 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 CSNK1G3Q9Y6M4 447 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 U3KQA8 63 aa12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 ARID1BQ8NFD5 2236 aaPredicted RBP12.38□□□□□ -0.43
CCDC85C-202ENST00000554877 URB1O60287 2271 aaKnown RBP12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 A0A0U1RQS6 177 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 CASC3O15234 703 aaKnown RBP12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 TLX3O43711 291 aaPredicted RBP12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 BRINP1O60477 761 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 CSO75390 466 aaKnown RBP12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 PROSCO94903 275 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 RASGRP1O95267 797 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 TNFP01375 233 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 CD48P09326 243 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 H2AFZP0C0S5 128 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 HOXB3P14651 431 aaPredicted RBP12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 CTPS1P17812 591 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 TGM2P21980 687 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 IL4RP24394 825 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 MMP12P39900 470 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 RPIAP49247 311 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 ZNF135P52742 658 aaPredicted RBP12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 HADHBP55084 474 aaKnown RBP12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 NSUN2Q08J23 767 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 PTPRRQ15256 657 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 TSR1Q2NL82 804 aaKnown RBP12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 ALG11Q2TAA5 492 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 PERM1Q5SV97 790 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 MARC1Q5VT66 337 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 ESRP1Q6NXG1 681 aaKnown RBP12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 LIPIQ6XZB0 460 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 H2AFVQ71UI9 128 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 PDZD3Q86UT5 571 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 PGBD5Q8N414 524 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 TEKT4Q8WW24 435 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 SCG3Q8WXD2 468 aaKnown RBP12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 DEPDC7Q96QD5 511 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 NRSN2Q9GZP1 204 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 NOD2Q9HC29 1040 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 SALL4Q9UJQ4 1053 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 INTUQ9ULD6 942 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 PADI4Q9UM07 663 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 GPR34Q9UPC5 381 aa12.37□□□□□ -0.43
CCDC85C-202ENST00000554877 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 TSPAN11A1L157 253 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 RCCD1A6NED2 376 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 CACNB4O00305 520 aaPredicted RBP12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 RRP8O43159 456 aaKnown RBP12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 AKR1B10O60218 316 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 CPP00450 1065 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 TPM1P09493 284 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 TNNT1P13805 278 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 MAN1A1P33908 653 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 MMP13P45452 471 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 ABCG1P45844 678 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 BLKP51451 505 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 HK3P52790 923 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 TAS2R40P59535 323 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 AP1S1P61966 158 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 MESDQ14696 234 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 NFATC4Q14934 902 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 ELOCQ15369 112 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 FAM182AQ5T1J6 154 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms