RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 PPP6CO00743 305 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 UBFD1O14562 309 aaKnown RBP15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 CRTAMO95727 393 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 PRSS56P0CW18 603 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 ATP6V1B1P15313 513 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 NRF1Q16656 503 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 IL23RQ5VWK5 629 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 REP15Q6BDI9 236 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 C17orf99Q6UX52 265 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 RPRD1AQ96P16 312 aaPredicted RBP15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 FAM192AQ9GZU8 254 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 ZCWPW1Q9H0M4 648 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 UBAP1Q9NZ09 502 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 SLC27A5Q9Y2P5 690 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 AP4B1Q9Y6B7 739 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 MYO16Q9Y6X6 1858 aa15.75■□□□□ 0.11
ARHGEF40-203ENST00000554514 HTTP42858 3142 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 SIX3O95343 332 aaPredicted RBP15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 MMP2P08253 660 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 ACVRL1P37023 503 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 LEPRP48357 1165 aaKnown RBP15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 POLD2P49005 469 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 RAB27AP51159 221 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 CLCN5P51795 746 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 XIAPP98170 497 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 AFMIDQ63HM1 303 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 UGT2A3Q6UWM9 527 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 PGBD5Q8N414 524 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 AFAP1L2Q8N4X5 818 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 TRIB2Q92519 343 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 SPATA16Q9BXB7 569 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 RIMS3Q9UJD0 308 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 FNDC3AQ9Y2H6 1198 aaKnown RBP15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 TRAF6Q9Y4K3 522 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 PCDHGA7Q9Y5G6 932 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 ZNF623O75123 536 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 RNASEH2AO75792 299 aaKnown RBP15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 DNAJB13P59910 316 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 HERC3Q15034 1050 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 KCNA10Q16322 511 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 FBXL22Q6P050 247 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 NUP93Q8N1F7 819 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 SCML4Q8N228 414 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 GALNT15Q8N3T1 639 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 SLC45A3Q96JT2 553 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 MAELQ96JY0 434 aaKnown RBP15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 DNAJC1Q96KC8 554 aaKnown RBP15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 SEMA3CQ99985 751 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 GABRQQ9UN88 632 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 FBP2O00757 339 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 BCAS2O75934 225 aaPredicted RBP15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 RBP1P09455 135 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 KIF19Q2TAC6 998 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 C10orf120Q5SQS8 335 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 CWF19L1Q69YN2 538 aaKnown RBP15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 KIAA0408Q6ZU52 694 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 CFAP52Q8N1V2 620 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 PELI3Q8N2H9 469 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 KLHDC9Q8NEP7 349 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 OR13C4Q8NGS5 318 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 UPF1Q92900 1129 aaKnown RBP eCLIP15.74■□□□□ 0.117e-11■■□□□ 11.5
ARHGEF40-203ENST00000554514 TSPAN17Q96FV3 270 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 BCAP29Q9UHQ4 241 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 TLR6Q9Y2C9 796 aa15.74■□□□□ 0.11
ARHGEF40-203ENST00000554514 CCDC160A6NGH7 325 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 TRIM38O00635 465 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 SLC22A2O15244 555 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 MON1AQ86VX9 555 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 SOCS4Q8WXH5 440 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 PTERQ96BW5 349 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 MYEOVQ96EZ4 313 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 CACNA2D2Q9NY47 1150 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 ACOT8O14734 319 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 PEX1O43933 1283 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 S1PR4O95977 384 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 CDKL1Q00532 357 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 IRF5Q13568 498 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 POLD3Q15054 466 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 ZFP1Q6P2D0 407 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 TTC16Q8NEE8 873 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 C3orf30Q96M34 536 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 PPP1R2P1Q96PQ5 205 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 GSTO2Q9H4Y5 243 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 EPS15L1Q9UBC2 864 aa15.73■□□□□ 0.11
ARHGEF40-203ENST00000554514 SCN4AP35499 1836 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 SLC12A8A0AV02 714 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 UBA6A0AVT1 1052 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 MRASO14807 208 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 KPNA6O60684 536 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 NELFEP18615 380 aaKnown RBP15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 ADSLP30566 484 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 OR1E1P30953 314 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 SOX11P35716 441 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 ROR2Q01974 943 aaKnown RBP15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 CRHR2Q13324 411 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 SQLEQ14534 574 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 DSC3Q14574 896 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 ACAP2Q15057 778 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 BEND5Q7L4P6 421 aa15.72■□□□□ 0.11
ARHGEF40-203ENST00000554514 CCDC117Q8IWD4 279 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms