RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 CCDC122Q5T0U0 273 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 C6orf132Q5T0Z8 1188 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 TXNRD3NBQ6F5E7 133 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 TMCO3Q6UWJ1 677 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 ENPP7Q6UWV6 458 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 DPPA4Q7L190 304 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 LSMEM2Q8N112 164 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 ATL2Q8NHH9 583 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 SNIP1Q8TAD8 396 aaKnown RBP11.18□□□□□ -0.62
ABCD4-221ENST00000554453 FAM71BQ8TC56 605 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 MAPK15Q8TD08 544 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 TSACCQ96A04 125 aaPredicted RBP11.18□□□□□ -0.62
ABCD4-221ENST00000554453 CSPG4P5Q96PW8 444 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 DEPDC7Q96QD5 511 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 LRRC61Q9BV99 259 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 NUP85Q9BW27 656 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 PCDH18Q9HCL0 1135 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 PADI4Q9UM07 663 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 FREM2Q5SZK8 3169 aa11.18□□□□□ -0.62
ABCD4-221ENST00000554453 TNFRSF10CO14798 259 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 RRP8O43159 456 aaKnown RBP11.17□□□□□ -0.62
ABCD4-221ENST00000554453 BRINP1O60477 761 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 DXOO77932 396 aaKnown RBP11.17□□□□□ -0.62
ABCD4-221ENST00000554453 TNFP01375 233 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 ALPIP09923 528 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 CTSEP14091 401 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 HNRNPH3P31942 346 aaKnown RBP11.17□□□□□ -0.62
ABCD4-221ENST00000554453 ACTN2P35609 894 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 SRP54P61011 504 aaKnown RBP11.17□□□□□ -0.62
ABCD4-221ENST00000554453 ISXQ2M1V0 245 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 ALG11Q2TAA5 492 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 SMTNL2Q2TAL5 461 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 RALGPS1Q5JS13 557 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 GUSBP11Q6P575 273 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 LRRC69Q6ZNQ3 347 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 EFL1Q7Z2Z2 1120 aaKnown RBP11.17□□□□□ -0.62
ABCD4-221ENST00000554453 HID1Q8IV36 788 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 SLC35F3Q8IY50 421 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 BBS5Q8N3I7 341 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 SCG3Q8WXD2 468 aaKnown RBP11.17□□□□□ -0.62
ABCD4-221ENST00000554453 HSPH1Q92598 858 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 NAT6Q93015 286 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 BTBD6Q96KE9 485 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 NUDCD1Q96RS6 583 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 KCTD5Q9NXV2 234 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 IFNKQ9P0W0 207 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 RCOR3Q9P2K3 495 aaPredicted RBP11.17□□□□□ -0.62
ABCD4-221ENST00000554453 PCDHB1Q9Y5F3 818 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 PCDHGC4Q9Y5F7 938 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.17□□□□□ -0.624e-7■□□□□ 11.3
ABCD4-221ENST00000554453 DGKBQ9Y6T7 804 aa11.17□□□□□ -0.62
ABCD4-221ENST00000554453 TTC24A2A3L6 582 aaPredicted RBP11.16□□□□□ -0.62
ABCD4-221ENST00000554453 SOCS5O75159 536 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 USP12O75317 370 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 CSO75390 466 aaKnown RBP11.16□□□□□ -0.62
ABCD4-221ENST00000554453 GYPCP04921 128 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 ELFN1P0C7U0 828 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 HOXB3P14651 431 aaPredicted RBP11.16□□□□□ -0.62
ABCD4-221ENST00000554453 GM2AP17900 193 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 ITPKBP27987 946 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 SERPINB6P35237 376 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 ABCG1P45844 678 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 ARSEP51690 589 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 CDH6P55285 790 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 KIAA1024LP59773 190 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 SLC25A11Q02978 314 aaKnown RBP11.16□□□□□ -0.62
ABCD4-221ENST00000554453 HADHQ16836 314 aaKnown RBP11.16□□□□□ -0.62
ABCD4-221ENST00000554453 TBC1D25Q3MII6 688 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 ATP13A4Q4VNC1 1196 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 SOWAHCQ53LP3 525 aaPredicted RBP11.16□□□□□ -0.62
ABCD4-221ENST00000554453 PERM1Q5SV97 790 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 MARC1Q5VT66 337 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 ESRP1Q6NXG1 681 aaKnown RBP11.16□□□□□ -0.62
ABCD4-221ENST00000554453 PNCKQ6P2M8 343 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 OGFOD3Q6PK18 319 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 RD3Q7Z3Z2 195 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 GKN2Q86XP6 184 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 PGBD5Q8N414 524 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 TEX26Q8N6G2 289 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 PLA2G15Q8NCC3 412 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 WDR48Q8TAF3 677 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 NSMCE1Q8WV22 266 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 COQ10AQ96MF6 247 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 WDR92Q96MX6 357 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 ZNF578Q96N58 590 aaPredicted RBP11.16□□□□□ -0.62
ABCD4-221ENST00000554453 DCBLD2Q96PD2 775 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 MGME1Q9BQP7 344 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 POLR1BQ9H9Y6 1135 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 NOD2Q9HC29 1040 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.16□□□□□ -0.62
ABCD4-221ENST00000554453 ANAPC7Q9UJX3 599 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 PHTF1Q9UMS5 762 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 NENFQ9UMX5 172 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 DOLKQ9UPQ8 538 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 PPIL1Q9Y3C6 166 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 OR1A2Q9Y585 309 aa11.16□□□□□ -0.62
ABCD4-221ENST00000554453 A8MX80 341 aa11.15□□□□□ -0.62
ABCD4-221ENST00000554453 CACNB4O00305 520 aaPredicted RBP11.15□□□□□ -0.62
ABCD4-221ENST00000554453 PDE2AO00408 941 aaPredicted RBP11.15□□□□□ -0.62
ABCD4-221ENST00000554453 NTN3O00634 580 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms