RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SDCBP2Q9H190 292 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 FOXP1Q9H334 677 aaPredicted RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 RPF1Q9H9Y2 349 aaKnown RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 EBF2Q9HAK2 575 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 TRPC7Q9HCX4 862 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 TOPORSQ9NS56 1045 aaPredicted RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 DDX43Q9NXZ2 648 aaKnown RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 CALCOCO1Q9P1Z2 691 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 ARHGAP26Q9UNA1 814 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 AGAP1Q9UPQ3 857 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 NOX1Q9Y5S8 564 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 CPQQ9Y646 472 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 PLXNA2O75051 1894 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 MYLKQ15746 1914 aa3.34□□□□□ -1.88
SLIRP-202ENST00000553981 LOC400499M0QZD8 3231 aa3.34□□□□□ -1.88
SLIRP-202ENST00000553981 DOCK9Q9BZ29 2069 aa3.34□□□□□ -1.88
SLIRP-202ENST00000553981 BSNQ9UPA5 3926 aa3.34□□□□□ -1.88
SLIRP-202ENST00000553981 TP53BP1Q12888 1972 aaPredicted RBP3.33□□□□□ -1.88
SLIRP-202ENST00000553981 AKAP13Q12802 2813 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 TMEM8BA6NDV4 472 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ZNF840PA6NDX5 716 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 MYMKA6NI61 221 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 LRRC3CA6NJW4 275 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 KPNA7A9QM74 516 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 C10orf142B7Z368 130 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 K7ENM7 598 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 COCHO43405 550 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 EPB41L2O43491 1005 aaKnown RBP3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ATG13O75143 517 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 TULP3O75386 442 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 REC8O95072 547 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 KAT7O95251 611 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 FKBP9O95302 570 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 TBX18O95935 607 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 WNT1P04628 370 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 PDGFRBP09619 1106 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 CSH1P0DML2 217 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 CSH2P0DML3 217 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ODC1P11926 461 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 HDCP19113 662 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 PTPN7P35236 360 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 AVPR1AP37288 418 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 IFNAR2P48551 515 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 LIG4P49917 911 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 COPAP53621 1224 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 IL2P60568 153 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 RAP2BP61225 183 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 SLC7A9P82251 487 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 BFSP1Q12934 665 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 TAF10Q12962 218 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 GRIK2Q13002 908 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 TMEM132DQ14C87 1099 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 PDGFRLQ15198 375 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 SHBQ15464 509 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 TRIP6Q15654 476 aaKnown RBP3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ELF2Q15723 593 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 MST1LQ2TV78 715 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 FBXO43Q4G163 708 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ARHGAP15Q53QZ3 475 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 TMEM215Q68D42 235 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ARMCX5Q6P1M9 558 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 C1orf228Q6PIY5 440 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 CPLX2Q6PUV4 134 aaKnown RBP3.33□□□□□ -1.88
SLIRP-202ENST00000553981 MED25Q71SY5 747 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 FKBP9P1Q75LS8 142 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 BHLHA9Q7RTU4 235 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ZNF720Q7Z2F6 126 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ZNF572Q7Z3I7 529 aaPredicted RBP3.33□□□□□ -1.88
SLIRP-202ENST00000553981 USP37Q86T82 979 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ITIH5Q86UX2 942 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 SFR1Q86XK3 245 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ZC3H3Q8IXZ2 948 aaKnown RBP3.33□□□□□ -1.88
SLIRP-202ENST00000553981 TRIML1Q8N9V2 468 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 SCAMP5Q8TAC9 235 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 LEO1Q8WVC0 666 aaPredicted RBP3.33□□□□□ -1.88
SLIRP-202ENST00000553981 HMGB4Q8WW32 186 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 NINJ1Q92982 152 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 RNF31Q96EP0 1072 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 PCED1BQ96HM7 432 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ZNF419Q96HQ0 510 aaPredicted RBP3.33□□□□□ -1.88
SLIRP-202ENST00000553981 BOD1Q96IK1 185 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 C8orf76Q96K31 380 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 KCNK16Q96T55 309 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ACBD6Q9BR61 282 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 MSTO1Q9BUK6 570 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 TTLL2Q9BWV7 592 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 B3GNT5Q9BYG0 378 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ZNF518BQ9C0D4 1074 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 MTMR12Q9C0I1 747 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 PDE11AQ9HCR9 933 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 EMC7Q9NPA0 242 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 TBC1D7Q9P0N9 293 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 CHORDC1Q9UHD1 332 aaPredicted RBP3.33□□□□□ -1.88
SLIRP-202ENST00000553981 DNM3Q9UQ16 869 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 ASXL3Q9C0F0 2248 aa3.33□□□□□ -1.88
SLIRP-202ENST00000553981 CKAP5Q14008 2032 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CHD8Q9HCK8 2581 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 TRAV19A0A0A6YYK7 116 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 A0A1B0GTW7 788 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CCDC78A2IDD5 438 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms