RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TRMT10CQ7L0Y3 403 aaKnown RBP14.62□□□□□ -0.07
SHMT2-208ENST00000553868 RELL1Q8IUW5 271 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 CNTD1Q8N815 330 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 OR52K2Q8NGK3 314 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 CEP76Q8TAP6 659 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 RBM15Q96T37 977 aaKnown RBP eCLIP14.62□□□□□ -0.07
SHMT2-208ENST00000553868 CINPQ9BW66 212 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-208ENST00000553868 SLC25A51Q9H1U9 297 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 LINC00597Q9H2U6 94 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 LRRC40Q9H9A6 602 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 NT5MQ9NPB1 228 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 IGSF5Q9NSI5 407 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 TOR4AQ9NXH8 423 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 PLK2Q9NYY3 685 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 ATP8A1Q9Y2Q0 1164 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 TTLL3Q9Y4R7 772 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 OR51B4Q9Y5P0 310 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 PLXND1Q9Y4D7 1925 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 TMEM63AO94886 807 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 AP2A1O95782 977 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 HLA-DQB2P05538 268 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 ATXN1LP0C7T5 689 aaKnown RBP14.61□□□□□ -0.07
SHMT2-208ENST00000553868 ADH5P11766 374 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 MZF1P28698 734 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-208ENST00000553868 CD68P34810 354 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-208ENST00000553868 EIF2S3P41091 472 aaKnown RBP14.61□□□□□ -0.07
SHMT2-208ENST00000553868 SULT2A1Q06520 285 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 ITKQ08881 620 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 SLC10A7Q0GE19 358 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 CBLBQ13191 982 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 CASP8Q14790 479 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 EML3Q32P44 896 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 INO80DQ53TQ3 878 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-208ENST00000553868 FSCBQ5H9T9 825 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 ANKRD22Q5VYY1 191 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 NAPEPLDQ6IQ20 393 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 LINC00523Q86TU6 105 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 CPA6Q8N4T0 437 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 LSM14AQ8ND56 463 aaKnown RBP14.61□□□□□ -0.07
SHMT2-208ENST00000553868 HMGB4Q8WW32 186 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 GDAP1L1Q96MZ0 367 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 TTC25Q96NG3 672 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 POLR1EQ9GZS1 481 aaKnown RBP14.61□□□□□ -0.07
SHMT2-208ENST00000553868 VIPAS39Q9H9C1 493 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 BCCIPQ9P287 314 aaKnown RBP eCLIP14.61□□□□□ -0.07
SHMT2-208ENST00000553868 PCOLCE2Q9UKZ9 415 aa14.61□□□□□ -0.07
SHMT2-208ENST00000553868 GOLGA8MH3BSY2 632 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 SUN1O94901 812 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 CYP17A1P05093 508 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 PABPC1P11940 636 aaKnown RBP14.6□□□□□ -0.07
SHMT2-208ENST00000553868 HOXD12P35452 270 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 RPL6Q02878 288 aaKnown RBP14.6□□□□□ -0.07
SHMT2-208ENST00000553868 SLC14A1Q13336 389 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 MPP3Q13368 585 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 PLEKHG6Q3KR16 790 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 PITRM1Q5JRX3 1037 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 GLRX5Q86SX6 157 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 KLHDC8BQ8IXV7 354 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.6□□□□□ -0.07
SHMT2-208ENST00000553868 PDCD7Q8N8D1 485 aaKnown RBP14.6□□□□□ -0.07
SHMT2-208ENST00000553868 FAM181AQ8N9Y4 354 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 WFIKKN2Q8TEU8 576 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 SETD7Q8WTS6 366 aaKnown RBP14.6□□□□□ -0.07
SHMT2-208ENST00000553868 UBLCP1Q8WVY7 318 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-208ENST00000553868 LRRC39Q96DD0 335 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 ALG14Q96F25 216 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 PSKH2Q96QS6 385 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 TXLNGYQ9BZA5 131 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 SAYSD1Q9NPB0 183 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 ABCB8Q9NUT2 735 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 VPS51Q9UID3 782 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 GGA2Q9UJY4 613 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 TEX15Q9BXT5 2789 aa14.6□□□□□ -0.07
SHMT2-208ENST00000553868 TCRBV7S3A2A0A539 114 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 E7ESA3 106 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 ZMPSTE24O75844 475 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 ALDH1A2O94788 518 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 SYPP08247 313 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 TSHRP16473 764 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 DPP6P42658 865 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 MAGEA4P43358 317 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 PDIA2Q13087 525 aaKnown RBP14.59□□□□□ -0.07
SHMT2-208ENST00000553868 SLC14A2Q15849 920 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 BBS9Q3SYG4 887 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 PREPLQ4J6C6 727 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-208ENST00000553868 RALGPS1Q5JS13 557 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 ALS2CLQ60I27 953 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 DENND2CQ68D51 928 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 LRRC8BQ6P9F7 803 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 SLC41A1Q8IVJ1 513 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 AHI1Q8N157 1196 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 PGBD3Q8N328 593 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 TXNDC5Q8NBS9 432 aaKnown RBP14.59□□□□□ -0.07
SHMT2-208ENST00000553868 WFDC5Q8TCV5 224 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 IMP4Q96G21 291 aaKnown RBP14.59□□□□□ -0.07
SHMT2-208ENST00000553868 PKNOX2Q96KN3 472 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 SERPINB12Q96P63 405 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 RUFY1Q96T51 708 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 MGME1Q9BQP7 344 aa14.59□□□□□ -0.07
SHMT2-208ENST00000553868 FUT8Q9BYC5 575 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms