RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 EFNA5P52803 228 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 ANAPC15P60006 121 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 SLC18A2Q05940 514 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 NEDD9Q14511 834 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 PPP2R5AQ15172 486 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 ME3Q16798 604 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 BTBD16Q32M84 506 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 GFOD2Q3B7J2 385 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 ATPAF1Q5TC12 328 aaPredicted RBP1.55□□□□□ -2.16
KTN1-211ENST00000553710 FAM53AQ6NSI3 398 aaPredicted RBP1.55□□□□□ -2.16
KTN1-211ENST00000553710 PP632Q6XCG6 107 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 GATAD2AQ86YP4 633 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 WDR63Q8IWG1 891 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 BMPERQ8N8U9 685 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 STAG1Q8WVM7 1258 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 ABTB1Q969K4 478 aaPredicted RBP1.55□□□□□ -2.16
KTN1-211ENST00000553710 ZNF300Q96RE9 604 aaPredicted RBP1.55□□□□□ -2.16
KTN1-211ENST00000553710 POLR3CQ9BUI4 534 aaPredicted RBP1.55□□□□□ -2.16
KTN1-211ENST00000553710 CLPBQ9H078 707 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 PRDM8Q9NQV8 689 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 INTS10Q9NVR2 710 aaKnown RBP1.55□□□□□ -2.16
KTN1-211ENST00000553710 C2orf42Q9NWW7 574 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 BARHL2Q9NY43 387 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 MAP3K20Q9NYL2 800 aaKnown RBP1.55□□□□□ -2.16
KTN1-211ENST00000553710 NDRG3Q9UGV2 375 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 MRPS28Q9Y2Q9 187 aaKnown RBP1.55□□□□□ -2.16
KTN1-211ENST00000553710 AMDHD2Q9Y303 409 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 PCDHGB5Q9Y5G0 923 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 CLDN16Q9Y5I7 305 aa1.55□□□□□ -2.16
KTN1-211ENST00000553710 A0A087X002 238 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 TYW5A2RUC4 315 aaKnown RBP1.54□□□□□ -2.16
KTN1-211ENST00000553710 WDR1O75083 606 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 CHN1P15882 459 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 ACADSP16219 412 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 CBLP22681 906 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 CDC25CP30307 473 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 HOXC8P31273 242 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 GJC1P36383 396 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 MTNR1AP48039 350 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 SEC61BP60468 96 aaKnown RBP1.54□□□□□ -2.16
KTN1-211ENST00000553710 TBX2Q13207 712 aaPredicted RBP1.54□□□□□ -2.16
KTN1-211ENST00000553710 IFIT5Q13325 482 aaKnown RBP1.54□□□□□ -2.16
KTN1-211ENST00000553710 DCTN1Q14203 1278 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 GALEQ14376 348 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 ARHGEF6Q15052 776 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 RPE65Q16518 533 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 NFE2Q16621 373 aaPredicted RBP1.54□□□□□ -2.16
KTN1-211ENST00000553710 TCTEX1D4Q5JR98 221 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 WDR38Q5JTN6 314 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 FAM209BQ5JX69 171 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 SIRPB2Q5JXA9 342 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 STXBP5Q5T5C0 1151 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 TRIM65Q6PJ69 517 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 HAPLN4Q86UW8 402 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 C11orf53Q8IXP5 236 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 FAM186BQ8IYM0 893 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 DSELQ8IZU8 1212 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 LINC00612Q8N6U2 182 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 PTGR2Q8N8N7 351 aaPredicted RBP1.54□□□□□ -2.16
KTN1-211ENST00000553710 DDHD1Q8NEL9 900 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 IPO4Q8TEX9 1081 aaKnown RBP1.54□□□□□ -2.16
KTN1-211ENST00000553710 NCSTNQ92542 709 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 TTC17Q96AE7 1141 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 KLHL29Q96CT2 875 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 FOXN4Q96NZ1 517 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 SYT11Q9BT88 431 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 SEPSECSQ9HD40 501 aaKnown RBP1.54□□□□□ -2.16
KTN1-211ENST00000553710 THAP1Q9NVV9 213 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 IFT80Q9P2H3 777 aaPredicted RBP1.54□□□□□ -2.16
KTN1-211ENST00000553710 CSAG2Q9Y5P2 127 aa1.54□□□□□ -2.16
KTN1-211ENST00000553710 IGLV5-45A0A087WSX0 123 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 GOLGA6L9A6NEM1 432 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 C17orf100A8MU93 164 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 PRKNO60260 465 aaPredicted RBP1.53□□□□□ -2.16
KTN1-211ENST00000553710 CIDEAO60543 219 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 ATP2C2O75185 946 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 SERPINC1P01008 464 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 CD48P09326 243 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 KRTAP1-4P0C5Y4 121 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 CD58P19256 250 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 S1PR1P21453 382 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 CLCNKAP51800 687 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 ARSFP54793 590 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 TUBB2AQ13885 445 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 GTF2H2Q13888 395 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 BYSLQ13895 437 aaKnown RBP1.53□□□□□ -2.16
KTN1-211ENST00000553710 IL13RA2Q14627 380 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 RPS6KA2Q15349 733 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 CTF1Q16619 201 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 SNAI3Q3KNW1 292 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 RUNDC3AQ59EK9 446 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 GPATCH4Q5T3I0 446 aaKnown RBP1.53□□□□□ -2.16
KTN1-211ENST00000553710 CEP350Q5VT06 3117 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 CES5AQ6NT32 575 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 GTF2H2CQ6P1K8 395 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 NFRKBQ6P4R8 1299 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 B3GNT6Q6ZMB0 384 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 TRPT1Q86TN4 253 aaKnown RBP1.53□□□□□ -2.16
KTN1-211ENST00000553710 ADIPOR2Q86V24 386 aa1.53□□□□□ -2.16
KTN1-211ENST00000553710 CHERPQ8IWX8 916 aaKnown RBP1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms