RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 CTSKP43235 329 aa22.93■■□□□ 1.26
TDP1-206ENST00000553569 EPHB1P54762 984 aa22.93■■□□□ 1.26
TDP1-206ENST00000553569 SKOR1P84550 965 aa22.93■■□□□ 1.26
TDP1-206ENST00000553569 PTAR1Q7Z6K3 402 aaPredicted RBP22.93■■□□□ 1.26
TDP1-206ENST00000553569 MFSD2AQ8NA29 543 aa22.93■■□□□ 1.26
TDP1-206ENST00000553569 GLOD4Q9HC38 313 aa22.93■■□□□ 1.26
TDP1-206ENST00000553569 TCRBV7S2A1N4TA0A589 114 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 F5H423 210 aaPredicted RBP22.92■■□□□ 1.26
TDP1-206ENST00000553569 TLR4O00206 839 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 LZTS3O60299 673 aaPredicted RBP22.92■■□□□ 1.26
TDP1-206ENST00000553569 FZD6O60353 706 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 RBP3P10745 1247 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 SDHBP21912 280 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 NFKBIAP25963 317 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 ID4P47928 161 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 PTPRRQ15256 657 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 DARS2Q6PI48 645 aaKnown RBP22.92■■□□□ 1.26
TDP1-206ENST00000553569 USP45Q70EL2 814 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 LPCAT1Q8NF37 534 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 PIH1D2Q8WWB5 315 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 SPOCK2Q92563 424 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 IMP4Q96G21 291 aaKnown RBP22.92■■□□□ 1.26
TDP1-206ENST00000553569 KLHDC7BQ96G42 594 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 TEKT5Q96M29 485 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 C1QTNF7Q9BXJ2 289 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 SLC25A51Q9H1U9 297 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 PCDH9Q9HC56 1237 aa22.92■■□□□ 1.26
TDP1-206ENST00000553569 TRMT1Q9NXH9 659 aaKnown RBP22.92■■□□□ 1.26
TDP1-206ENST00000553569 FNDC3AQ9Y2H6 1198 aaKnown RBP22.92■■□□□ 1.26
TDP1-206ENST00000553569 LAMA1P25391 3075 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 GOLGA8CPA6NN73 597 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 A6NNZ2 444 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 ZSCAN12O43309 604 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 ALPIP09923 528 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 THEGLP0DJG4 465 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 CYP2A6P11509 494 aaPredicted RBP22.91■■□□□ 1.26
TDP1-206ENST00000553569 NFKB1P19838 968 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 VIPR1P32241 457 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 NXPH1P58417 271 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 KLF1Q13351 362 aaPredicted RBP22.91■■□□□ 1.26
TDP1-206ENST00000553569 PCSK7Q16549 785 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 LIPIQ6XZB0 460 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 KDM7AQ6ZMT4 941 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 IQCHQ86VS3 1027 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 REXO1L1PQ8IX06 675 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 ZNF567Q8N184 647 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 DENND6BQ8NEG7 585 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 OR13H1Q8NG92 308 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 SPATA22Q8NHS9 363 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 UBE2Q2Q8WVN8 375 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 ASB12Q8WXK4 309 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 LENG8Q96PV6 779 aaPredicted RBP22.91■■□□□ 1.26
TDP1-206ENST00000553569 SMIM14Q96QK8 99 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 KLF6Q99612 283 aaPredicted RBP22.91■■□□□ 1.26
TDP1-206ENST00000553569 GDF3Q9NR23 364 aa22.91■■□□□ 1.26
TDP1-206ENST00000553569 DNAAF2Q9NVR5 837 aaKnown RBP22.91■■□□□ 1.26
TDP1-206ENST00000553569 R3HDM2Q9Y2K5 976 aaKnown RBP22.91■■□□□ 1.26
TDP1-206ENST00000553569 KNL1Q8NG31 2342 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 POM121BA6NF01 834 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 NPIPB15A6NHN6 443 aaPredicted RBP22.9■■□□□ 1.26
TDP1-206ENST00000553569 FPGTO14772 594 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 MAGEC1O60732 1142 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 CD68P34810 354 aaPredicted RBP22.9■■□□□ 1.26
TDP1-206ENST00000553569 IGFALSP35858 605 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 IL9RQ01113 521 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 OVGP1Q12889 678 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 PRAMEF14Q5SWL7 426 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 DENND2CQ68D51 928 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 KYAT3Q6YP21 454 aaKnown RBP22.9■■□□□ 1.26
TDP1-206ENST00000553569 PID1Q7Z2X4 250 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 ABI3BPQ7Z7G0 1075 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 NDUFAF2Q8N183 169 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 TTC13Q8NBP0 860 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 BMFQ96LC9 184 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 VAT1Q99536 393 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 FERMT1Q9BQL6 677 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 RTKNQ9BST9 563 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 DLL3Q9NYJ7 618 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 UBP1Q9NZI7 540 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 HS3ST3A1Q9Y663 406 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 DMXL1Q9Y485 3027 aa22.9■■□□□ 1.26
TDP1-206ENST00000553569 ASCC3Q8N3C0 2202 aaKnown RBP22.89■■□□□ 1.26
TDP1-206ENST00000553569 KCNN4O15554 427 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 MT-CYBP00156 380 aaPredicted RBP22.89■■□□□ 1.25
TDP1-206ENST00000553569 PRLP01236 227 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 LHCGRP22888 699 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 CCDC173Q0VFZ6 552 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 GALNT3Q14435 633 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 ACOX1Q15067 660 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 IRF4Q15306 451 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 CNGA3Q16281 694 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 Q6ZSR6 202 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 KDELC2Q7Z4H8 507 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 TSPAN33Q86UF1 283 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 SPATS2Q86XZ4 545 aaKnown RBP22.89■■□□□ 1.25
TDP1-206ENST00000553569 TP53I13Q8NBR0 393 aaPredicted RBP22.89■■□□□ 1.25
TDP1-206ENST00000553569 CENPTQ96BT3 561 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 MCCC1Q96RQ3 725 aaPredicted RBP22.89■■□□□ 1.25
TDP1-206ENST00000553569 TLR10Q9BXR5 811 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 CARD9Q9H257 536 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms