RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 ARMC3Q5W041 872 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 REP15Q6BDI9 236 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 PIM3Q86V86 326 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 TICAM1Q8IUC6 712 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 OR9I1Q8NGQ6 314 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 OR13J1Q8NGT2 312 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 HDAC10Q969S8 669 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 DGCR14Q96DF8 476 aaKnown RBP13.1□□□□□ -0.31
CACNB3-219ENST00000551544 CCDC126Q96EE4 140 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 FAR2Q96K12 515 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 MEAF6Q9HAF1 191 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 CACNA2D2Q9NY47 1150 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 DSEQ9UL01 958 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 CRYL1Q9Y2S2 319 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 VWA7Q9Y334 891 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 KCTD3Q9Y597 815 aa13.1□□□□□ -0.31
CACNB3-219ENST00000551544 TNFRSF10BO14763 440 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 CLPTM1O96005 669 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 HAPLN1P10915 354 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 ETFBP38117 255 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 KCNC1P48547 511 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 RENBPP51606 427 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 CDKN2DP55273 166 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 PRAMEP78395 509 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 TRIM25Q14258 630 aaKnown RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 SQLEQ14534 574 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 MAPRE1Q15691 268 aaKnown RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 NRF1Q16656 503 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 SLC39A12Q504Y0 691 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 MARC1Q5VT66 337 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 AFMIDQ63HM1 303 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 CYP2R1Q6VVX0 501 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 CHSY3Q70JA7 882 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 BEND5Q7L4P6 421 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 RYBPQ8N488 228 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 SH3RF2Q8TEC5 729 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 EME1Q96AY2 570 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 ASB9Q96DX5 294 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 TSPAN17Q96FV3 270 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 UTP6Q9NYH9 597 aaKnown RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 Q9Y3F1 56 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 TRAF6Q9Y4K3 522 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 NYNRINQ9P2P1 1898 aaKnown RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 IQCA1LA6NCM1 817 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 M0QZQ0 153 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 UBFD1O14562 309 aaKnown RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 TRPA1O75762 1119 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 PEX11BO96011 259 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 SPATA31D3P0C874 917 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 HTR7P34969 479 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 MAPRE2Q15555 327 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 TMEM207Q6UWW9 146 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 SPATA31D4Q6ZUB0 917 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 MRPL10Q7Z7H8 261 aaKnown RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 CILP2Q8IUL8 1156 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 TMEM126BQ8IUX1 230 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 TMEM102Q8N9M5 508 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 IMP4Q96G21 291 aaKnown RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 PRPF18Q99633 342 aaKnown RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 MTG1Q9BT17 334 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 UNC93B1Q9H1C4 597 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 SP110Q9HB58 689 aa13.09□□□□□ -0.31
CACNB3-219ENST00000551544 FBRSL1Q9HCM7 1045 aaKnown RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 MARCH4Q9P2E8 410 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-219ENST00000551544 CCDC160A6NGH7 325 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 CNTN5O94779 1100 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 TMCC1O94876 653 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 CELF2O95319 508 aaKnown RBP13.08□□□□□ -0.31
CACNB3-219ENST00000551544 SNRPB2P08579 225 aaKnown RBP13.08□□□□□ -0.31
CACNB3-219ENST00000551544 FGFR3P22607 806 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 GPR15P49685 360 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 CDH13P55290 713 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 MYBPC1Q00872 1141 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 TUSC3Q13454 348 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 IRF5Q13568 498 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 LRP8Q14114 963 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 IHHQ14623 411 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 ACAP2Q15057 778 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 ALFQ53S48 1182 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 C2orf69Q8N8R5 385 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 OR52K2Q8NGK3 314 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 GABPB2Q8TAK5 448 aaPredicted RBP13.08□□□□□ -0.31
CACNB3-219ENST00000551544 LPGAT1Q92604 370 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 PSMG2Q969U7 264 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 UBXN10Q96LJ8 280 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 PRICKLE1Q96MT3 831 aaPredicted RBP13.08□□□□□ -0.31
CACNB3-219ENST00000551544 SERPINB11Q96P15 392 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 ADAM2Q99965 735 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 GSTO2Q9H4Y5 243 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 LMCD1Q9NZU5 365 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 AP4S1Q9Y587 144 aa13.08□□□□□ -0.31
CACNB3-219ENST00000551544 SCN4AP35499 1836 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 PRORSD1PA6NEY8 169 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 MRASO14807 208 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 TFAP2AP05549 437 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 AKR1A1P14550 325 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 RPL5P46777 297 aaKnown RBP13.08□□□□□ -0.32
CACNB3-219ENST00000551544 NME5P56597 212 aa13.08□□□□□ -0.32
CACNB3-219ENST00000551544 YWHAHQ04917 246 aaPredicted RBP13.08□□□□□ -0.32
CACNB3-219ENST00000551544 TAF1CQ15572 869 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms