RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 PCDHB9Q9Y5E1 797 aa14.29□□□□□ -0.12
LETMD1-229ENST00000551261 NUMBLQ9Y6R0 609 aa14.29□□□□□ -0.12
LETMD1-229ENST00000551261 MUC22E2RYF6 1773 aaPredicted RBP14.29□□□□□ -0.12
LETMD1-229ENST00000551261 TNRC18O15417 2968 aaPredicted RBP14.28□□□□□ -0.12
LETMD1-229ENST00000551261 A0A0J9YYE9 177 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 SRRM3A6NNA2 597 aaPredicted RBP14.28□□□□□ -0.12
LETMD1-229ENST00000551261 TRBC1P01850 177 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 MT-ND3P03897 115 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 PRNPP04156 253 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 GLULP15104 373 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 OGNP20774 298 aaKnown RBP14.28□□□□□ -0.12
LETMD1-229ENST00000551261 HMGCLP35914 325 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 OPRD1P41143 372 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 ZNF140P52738 457 aaPredicted RBP14.28□□□□□ -0.12
LETMD1-229ENST00000551261 GRM2Q14416 872 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 ELAVL3Q14576 367 aaKnown RBP14.28□□□□□ -0.12
LETMD1-229ENST00000551261 EFTUD2Q15029 972 aaKnown RBP eCLIP14.28□□□□□ -0.12
LETMD1-229ENST00000551261 PTPRNQ16849 979 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 HSP90AA5PQ58FG0 334 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 TEDDM1Q5T9Z0 273 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 TMEM215Q68D42 235 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 EXOC3L1Q86VI1 746 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 C12orf40Q86WS4 652 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 OR13J1Q8NGT2 312 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 OR2A12Q8NGT7 310 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 GPR150Q8NGU9 434 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 MZB1Q8WU39 189 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 PDCD6IPQ8WUM4 868 aaKnown RBP14.28□□□□□ -0.12
LETMD1-229ENST00000551261 PIH1D2Q8WWB5 315 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 ISL2Q96A47 359 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 MCCC1Q96RQ3 725 aaPredicted RBP14.28□□□□□ -0.12
LETMD1-229ENST00000551261 TCF12Q99081 682 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 TNKS2Q9H2K2 1166 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 RHOJQ9H4E5 214 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 C8orf33Q9H7E9 229 aaPredicted RBP14.28□□□□□ -0.12
LETMD1-229ENST00000551261 FBRSQ9HAH7 460 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 SMYD2Q9NRG4 433 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 CTNNAL1Q9UBT7 734 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 CDH22Q9UJ99 828 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 STARD13Q9Y3M8 1113 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 PKP3Q9Y446 797 aa14.28□□□□□ -0.12
LETMD1-229ENST00000551261 TTC24A2A3L6 582 aaPredicted RBP14.27□□□□□ -0.13
LETMD1-229ENST00000551261 POLR3GO15318 223 aaPredicted RBP14.27□□□□□ -0.13
LETMD1-229ENST00000551261 TM9SF1O15321 606 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 GJB3O75712 270 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 KAT7O95251 611 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 VAPBO95292 243 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 ERVK-10P10266 1014 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 BRAFP15056 766 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 ZNF30P17039 623 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 HPDP32754 393 aaPredicted RBP14.27□□□□□ -0.13
LETMD1-229ENST00000551261 TNFRSF4P43489 277 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 SERPINB8P50452 374 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 PFKPQ01813 784 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 CNGA3Q16281 694 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 HNRNPA1L2Q32P51 320 aaKnown RBP14.27□□□□□ -0.13
LETMD1-229ENST00000551261 FNDC3BQ53EP0 1204 aaKnown RBP14.27□□□□□ -0.13
LETMD1-229ENST00000551261 RNF187Q5TA31 235 aaPredicted RBP14.27□□□□□ -0.13
LETMD1-229ENST00000551261 NEPROQ6NW34 567 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 ESRP1Q6NXG1 681 aaKnown RBP14.27□□□□□ -0.13
LETMD1-229ENST00000551261 GDPD4Q6W3E5 623 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 DPY19L3Q6ZPD9 716 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 Q6ZVU0 165 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 CAMK1DQ8IU85 385 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 RNF135Q8IUD6 432 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 SRRM1Q8IYB3 904 aaKnown RBP14.27□□□□□ -0.13
LETMD1-229ENST00000551261 PTPRN2Q92932 1015 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 CENPTQ96BT3 561 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 SCRN2Q96FV2 425 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 PPP1R16AQ96I34 528 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 PHF7Q9BWX1 381 aaPredicted RBP14.27□□□□□ -0.13
LETMD1-229ENST00000551261 ZDHHC6Q9H6R6 413 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 RAD18Q9NS91 495 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 PSD3Q9NYI0 1048 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 NKIRAS1Q9NYS0 192 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 SUN2Q9UH99 717 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 IL36AQ9UHA7 158 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 SLCO3A1Q9UIG8 710 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 ZNF711Q9Y462 761 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 MYO9BQ13459 2157 aa14.27□□□□□ -0.13
LETMD1-229ENST00000551261 TBC1D3BA6NDS4 549 aa14.26□□□□□ -0.13
LETMD1-229ENST00000551261 FAM47DPA6NHR8 397 aa14.26□□□□□ -0.13
LETMD1-229ENST00000551261 CXorf49A8MYA2 514 aaPredicted RBP14.26□□□□□ -0.13
LETMD1-229ENST00000551261 TRIM49D1C9J1S8 452 aa14.26□□□□□ -0.13
LETMD1-229ENST00000551261 STX7O15400 261 aaKnown RBP14.26□□□□□ -0.13
LETMD1-229ENST00000551261 MBTPS2O43462 519 aa14.26□□□□□ -0.13
LETMD1-229ENST00000551261 ZWINTO95229 277 aa14.26□□□□□ -0.13
LETMD1-229ENST00000551261 ITGA2BP08514 1039 aa14.26□□□□□ -0.13
LETMD1-229ENST00000551261 PDHA1P08559 390 aa14.26□□□□□ -0.13
LETMD1-229ENST00000551261 CYP2A6P11509 494 aaPredicted RBP14.26□□□□□ -0.13
LETMD1-229ENST00000551261 HNRNPLP14866 589 aaKnown RBP eCLIP14.26□□□□□ -0.13
LETMD1-229ENST00000551261 PPARGP37231 505 aaPredicted RBP14.26□□□□□ -0.13
LETMD1-229ENST00000551261 CCNFP41002 786 aa14.26□□□□□ -0.13
LETMD1-229ENST00000551261 CD151P48509 253 aa14.26□□□□□ -0.13
LETMD1-229ENST00000551261 KDSRQ06136 332 aa14.26□□□□□ -0.13
LETMD1-229ENST00000551261 GABPB1Q06547 395 aaPredicted RBP14.26□□□□□ -0.13
LETMD1-229ENST00000551261 ZNF470Q6ECI4 717 aa14.26□□□□□ -0.13
LETMD1-229ENST00000551261 TPRG1Q6ZUI0 275 aa14.26□□□□□ -0.13
LETMD1-229ENST00000551261 TRMT11Q7Z4G4 463 aaKnown RBP14.26□□□□□ -0.13
LETMD1-229ENST00000551261 STRA8Q7Z7C7 330 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms