RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 OR52E6Q96RD3 313 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 SEMA3CQ99985 751 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 COL14A1Q05707 1796 aaKnown RBP12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 ASGR1P07306 291 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 PPM1AP35813 382 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 AIF1P55008 147 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 RPL38P63173 70 aaKnown RBP12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 GTF2BQ00403 316 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 MAP1SQ66K74 1059 aaPredicted RBP12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 PIWIL4Q7Z3Z4 852 aaKnown RBP12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 EPB41L1Q9H4G0 881 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 NECTIN3Q9NQS3 549 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 COL1A2P08123 1366 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 G3V2T6 193 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 ANXA8L1Q5VT79 327 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 PTGR2Q8N8N7 351 aaPredicted RBP12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 TRPV3Q8NET8 790 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 FUCA2Q9BTY2 467 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 TMEM138Q9NPI0 162 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 A0A087X0B3 334 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 UBE2QL1A1L167 161 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 BTN3A3O00478 584 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 EARS2Q5JPH6 523 aaKnown RBP12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 CXCL17Q6UXB2 119 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 KIAA1324Q6UXG2 1013 aaKnown RBP12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 PHYKPLQ8IUZ5 450 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 OR4L1Q8NH43 312 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 ZNF398Q8TD17 642 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 WDR60Q8WVS4 1066 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 DUSP16Q9BY84 665 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 LMAN2LQ9H0V9 348 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 DDX4Q9NQI0 724 aaKnown RBP12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 CMTM6Q9NX76 183 aa12.55□□□□□ -0.4
RAB3IP-212ENST00000550536 IDH3BO43837 385 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 SRP54P61011 504 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 RGS21Q2M5E4 152 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 TNS4Q8IZW8 715 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 KBTBD8Q8NFY9 601 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 CKAP2Q8WWK9 683 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 PANX1Q96RD7 426 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 GLIS2Q9BZE0 524 aaPredicted RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 TFEBP19484 476 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 NAGLUP54802 743 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 MARK2Q7KZI7 788 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 PDCD10Q9BUL8 212 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 TAS2R14Q9NYV8 317 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 MRTO4Q9UKD2 239 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 IRGMA1A4Y4 181 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 CST1P01037 141 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 ERBB2P04626 1255 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 MYBL2P10244 700 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 C16orf46Q6P387 395 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 EEF1AKMT1Q8WVE0 214 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 MTMR9Q96QG7 549 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 RNPEPL1Q9HAU8 725 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 C8orf4Q9NR00 106 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 CACNB4O00305 520 aaPredicted RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 SLC25A14O95258 325 aaPredicted RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 SHBGP04278 402 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 FBXO42Q6P3S6 717 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 FAM151BQ6UXP7 276 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 HEXDCQ8WVB3 486 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 LINGO1Q96FE5 620 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 DISP2A7MBM2 1401 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 IQCMA0A1B0GVH7 501 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 TAF4O00268 1085 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 FSBPO95073 299 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 LINC00032P0C843 101 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 GALNT3Q14435 633 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 AP5B1Q2VPB7 878 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 ZDHHC20Q5W0Z9 365 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 APTXQ7Z2E3 356 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 ZNF540Q8NDQ6 660 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 ANKRD63C9JTQ0 380 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 LIN7AO14910 233 aaPredicted RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 ITGA2BP08514 1039 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 ADSSP30520 456 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 CASP5P51878 434 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 ADARP55265 1226 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 MYBPC1Q00872 1141 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 CBX2Q14781 532 aaPredicted RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 PDK4Q16654 411 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 ILDR1Q86SU0 546 aaPredicted RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 IFNLR1Q8IU57 520 aaPredicted RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 SNRNP25Q9BV90 132 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 PRDM8Q9NQV8 689 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 OGDHLQ9ULD0 1010 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 ST3GAL5Q9UNP4 418 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 SAMHD1Q9Y3Z3 626 aaKnown RBP12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 IRAK3Q9Y616 596 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 OR10H3O60404 316 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 UGT2B17O75795 530 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 PTPRAP18433 802 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 NR1D2Q14995 579 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 DACT2Q5SW24 774 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 MCRS1Q96EZ8 462 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 MBOAT7Q96N66 472 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 TM6SF2Q9BZW4 377 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 LRRC19Q9H756 370 aa12.54□□□□□ -0.4
RAB3IP-212ENST00000550536 ATRNO75882 1429 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms