RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 LIPIQ6XZB0 460 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 SLC36A4Q6YBV0 504 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 DPPA4Q7L190 304 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TSPAN33Q86UF1 283 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TBC1D3Q8IZP1 549 aaPredicted RBP13.1□□□□□ -0.31
RAB5C-206ENST00000550406 GRK7Q8WTQ7 553 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 SPACA7Q96KW9 195 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 APOL2Q9BQE5 337 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TRIM51Q9BSJ1 452 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TUBB2BQ9BVA1 445 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 PREBQ9HCU5 417 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 FAM86C1Q9NVL1 165 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 FEZ2Q9UHY8 353 aaPredicted RBP13.1□□□□□ -0.31
RAB5C-206ENST00000550406 SPO11Q9Y5K1 396 aa13.1□□□□□ -0.31
RAB5C-206ENST00000550406 TP53BP1Q12888 1972 aaPredicted RBP13.1□□□□□ -0.31
RAB5C-206ENST00000550406 SDK1Q7Z5N4 2213 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 A0A1W2PQU0 124 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 IGLON5A6NGN9 336 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 LRRC72A6NJI9 287 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 MAP3K13O43283 966 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 RAD51CO43502 376 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 TSPAN6O43657 245 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 MMP20O60882 483 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 SUN1O94901 812 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 PCDH8O95206 1070 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 PIRTP0C851 137 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 XPAP23025 273 aaPredicted RBP13.09□□□□□ -0.31
RAB5C-206ENST00000550406 ACTN2P35609 894 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 PTGER3P43115 390 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 GRIA4P48058 902 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 PTPN5P54829 565 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 FAM193AP78312 1265 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 CKAP4Q07065 602 aaKnown RBP13.09□□□□□ -0.31
RAB5C-206ENST00000550406 SIM2Q14190 667 aaPredicted RBP13.09□□□□□ -0.31
RAB5C-206ENST00000550406 KCNJ11Q14654 390 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 ZNF284Q2VY69 593 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 ANKRD22Q5VYY1 191 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 KIAA0895LQ68EN5 471 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 RALGAPA1Q6GYQ0 2036 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 NEK5Q6P3R8 708 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 CRTC1Q6UUV9 634 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 RFLNAQ6ZTI6 216 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 USP34Q70CQ2 3546 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 TRIM69Q86WT6 500 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 HORMAD1Q86X24 394 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 JAMLQ86YT9 394 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 CADM4Q8NFZ8 388 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 CPT1BQ92523 772 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 KLK6Q92876 244 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 BIRC7Q96CA5 298 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 EID2BQ96D98 161 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 RMDN1Q96DB5 314 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 IFT43Q96FT9 208 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 LYSMD1Q96S90 227 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 TBL1YQ9BQ87 522 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 WRAP53Q9BUR4 548 aaKnown RBP13.09□□□□□ -0.31
RAB5C-206ENST00000550406 ADGRE3Q9BY15 652 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 ARNT2Q9HBZ2 717 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 COQ6Q9Y2Z9 468 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 SLCO1B1Q9Y6L6 691 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 GON4LQ3T8J9 2241 aa13.09□□□□□ -0.31
RAB5C-206ENST00000550406 ZNF106Q9H2Y7 1883 aaKnown RBP13.08□□□□□ -0.32
RAB5C-206ENST00000550406 ADAMTS9Q9P2N4 1935 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 CAPN8A6NHC0 703 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 AURKAO14965 403 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 PSMD3O43242 534 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 LATO43561 262 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 HEXIM1O94992 359 aaKnown RBP13.08□□□□□ -0.32
RAB5C-206ENST00000550406 FSBPO95073 299 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 CLDN7O95471 211 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 GAS8O95995 478 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 HLA-DPA1P20036 260 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 CA4P22748 312 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 MAOBP27338 520 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 MAT2AP31153 395 aaKnown RBP13.08□□□□□ -0.32
RAB5C-206ENST00000550406 VIPR1P32241 457 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 PI4KAP42356 2102 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 MAGEA6P43360 314 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 LIG3P49916 1009 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 CCR5P51681 352 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 TERF1P54274 439 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 EPHB1P54762 984 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 DR1Q01658 176 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 PTSQ03393 145 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 ELP6Q0PNE2 266 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 DHX34Q14147 1143 aaKnown RBP13.08□□□□□ -0.32
RAB5C-206ENST00000550406 CNGA3Q16281 694 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 ERAP2Q6P179 960 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 CEP68Q76N32 757 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 HSD11B1LQ7Z5J1 315 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 SUMF1Q8NBK3 374 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 NOA1Q8NC60 698 aaKnown RBP13.08□□□□□ -0.32
RAB5C-206ENST00000550406 C1orf216Q8TAB5 229 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 ATOH1Q92858 354 aaPredicted RBP13.08□□□□□ -0.32
RAB5C-206ENST00000550406 RUNDC3BQ96NL0 473 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 PPP1R2P1Q96PQ5 205 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 C1QTNF2Q9BXJ5 285 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 PCED1AQ9H1Q7 454 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 EPC1Q9H2F5 836 aa13.08□□□□□ -0.32
RAB5C-206ENST00000550406 LRRC40Q9H9A6 602 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms