RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 RBMS1P29558 406 aaKnown RBP7.7□□□□□ -1.18
NEK3-201ENST00000550331 RFC1P35251 1148 aaPredicted RBP7.7□□□□□ -1.18
NEK3-201ENST00000550331 BLKP51451 505 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 RHOAP61586 193 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 ELP6Q0PNE2 266 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 GRM3Q14832 879 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 KRT31Q15323 416 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 CLEC16AQ2KHT3 1053 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 TMEM52BQ4KMG9 183 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 C3orf38Q5JPI3 329 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 FKBP15Q5T1M5 1219 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 ATXN7L2Q5T6C5 722 aaPredicted RBP7.7□□□□□ -1.18
NEK3-201ENST00000550331 CDKAL1Q5VV42 579 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 ESRP1Q6NXG1 681 aaKnown RBP7.7□□□□□ -1.18
NEK3-201ENST00000550331 LVRNQ6Q4G3 990 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 LYPD8Q6UX82 237 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 LEKR1Q6ZMV7 388 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 SLFN11Q7Z7L1 901 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 PHLDB2Q86SQ0 1253 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 CD163Q86VB7 1156 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 VPS36Q86VN1 386 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 ZNF354CQ86Y25 554 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 SLC35F3Q8IY50 421 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 RBFAQ8N0V3 343 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 SDR16C5Q8N3Y7 309 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 FSTL5Q8N475 847 aaPredicted RBP7.7□□□□□ -1.18
NEK3-201ENST00000550331 TP53I13Q8NBR0 393 aaPredicted RBP7.7□□□□□ -1.18
NEK3-201ENST00000550331 SLC30A5Q8TAD4 765 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 HCAR2Q8TDS4 363 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 TTC9Q92623 222 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 CCDC97Q96F63 343 aaPredicted RBP7.7□□□□□ -1.18
NEK3-201ENST00000550331 MED8Q96G25 268 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 ATXN7L3BQ96GX2 97 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 SLC46A1Q96NT5 459 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 PCDHB18PQ96TA0 734 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 SELENOOQ9BVL4 669 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 CPEB1Q9BZB8 566 aaKnown RBP7.7□□□□□ -1.18
NEK3-201ENST00000550331 SLC13A1Q9BZW2 595 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 VPS16Q9H269 839 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 CATSPERBQ9H7T0 1116 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 NLRC4Q9NPP4 1024 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 DONSONQ9NYP3 566 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 ADAM22Q9P0K1 906 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 SATB2Q9UPW6 733 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 SIK3Q9Y2K2 1263 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 ENTPD2Q9Y5L3 495 aa7.7□□□□□ -1.18
NEK3-201ENST00000550331 A0A1W2PNU3 283 aaPredicted RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 TCRBV5S1A1TA0A578 114 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 ANKRD62A6NC57 917 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 CDRT15L2A8MXV6 281 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 RASA4BC9J798 803 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 MUSKO15146 869 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 YY2O15391 372 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 FGF10O15520 208 aaPredicted RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 RASA4O43374 803 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 MMP20O60882 483 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 GCATO75600 419 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 GJB6O95452 261 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 F12P00748 615 aaPredicted RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 ALPIP09923 528 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 TSHRP16473 764 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 XPAP23025 273 aaPredicted RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 HTR1BP28222 390 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 HTR7P34969 479 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 EIF4A3P38919 411 aaKnown RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 KLK7P49862 253 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 ZNF143P52747 638 aaPredicted RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 PDX1P52945 283 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 ADKP55263 362 aaKnown RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 PPARDQ03181 441 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 VAC14Q08AM6 782 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 EIF3IQ13347 325 aaKnown RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 SERINC3Q13530 473 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 C1orf61Q13536 156 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 SPIDRQ14159 915 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 LRRC14Q15048 493 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 IRF4Q15306 451 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 ELOCQ15369 112 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 SYCP1Q15431 976 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 UGP2Q16851 508 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 KLHL40Q2TBA0 621 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 LRRC73Q5JTD7 316 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 PERM1Q5SV97 790 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 FAXCQ5TGI0 409 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 DNAJC24Q6P3W2 148 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 WDR59Q6PJI9 974 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 MON1BQ7L1V2 547 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 CLEC14AQ86T13 490 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 DNAAF5Q86Y56 855 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 UMODL1-AS1Q8N2C9 162 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 ARL14Q8N4G2 192 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 ARL10Q8N8L6 244 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 ATL2Q8NHH9 583 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 WDR36Q8NI36 951 aaKnown RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 SCG3Q8WXD2 468 aaKnown RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 HMCESQ96FZ2 354 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 PRR11Q96HE9 360 aaPredicted RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 VCPIP1Q96JH7 1222 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 ZNF641Q96N77 438 aaPredicted RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 NCAPGQ9BPX3 1015 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms