RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 NEMP1O14524 444 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 TSPAN6O43657 245 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 SH3BP5O60239 455 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 ZNF500O60304 480 aaPredicted RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 MT-CYBP00156 380 aaPredicted RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 CPP00450 1065 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 MX2P20592 715 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 TGM2P21980 687 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 HNRNPA2B1P22626 353 aaKnown RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 RBL1P28749 1068 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 RENBPP51606 427 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 RPS21P63220 83 aaKnown RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 BNIP3Q12983 259 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 KLF1Q13351 362 aaPredicted RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 OLIG2Q13516 323 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 TFDP2Q14188 446 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 PDK1Q15118 436 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 IRF4Q15306 451 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 CNGA3Q16281 694 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 ZNF423Q2M1K9 1284 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 SETMARQ53H47 684 aaPredicted RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 MEI1Q5TIA1 1274 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 KIAA1161Q6NSJ0 714 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 TIGD7Q6NT04 549 aaPredicted RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 BRAT1Q6PJG6 821 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 LIPIQ6XZB0 460 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 DPPA4Q7L190 304 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 KDELC2Q7Z4H8 507 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 HSD11B1LQ7Z5J1 315 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 ABI3BPQ7Z7G0 1075 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 GATAD2AQ86YP4 633 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 ZNF567Q8N184 647 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 CBARPQ8N350 705 aaPredicted RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 DEFB124Q8NES8 71 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 HCAR2Q8TDS4 363 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 RAB7BQ96AH8 199 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 EID2BQ96D98 161 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 IMP4Q96G21 291 aaKnown RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 OXNAD1Q96HP4 312 aaPredicted RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 FEM1CQ96JP0 617 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 TRIB3Q96RU7 358 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 TDRD1Q9BXT4 1180 aaKnown RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 POLR1EQ9GZS1 481 aaKnown RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 UBP1Q9NZI7 540 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.27□□□□□ -0.61
RAB5B-208ENST00000550283 PYCARDQ9ULZ3 195 aa11.27□□□□□ -0.61
RAB5B-208ENST00000550283 SPTBN2O15020 2390 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-208ENST00000550283 APOC4-APOC2K7ER74 178 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 SDC3O75056 442 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 SOCS5O75159 536 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 APOC2P02655 101 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 CCDC175P0C221 793 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 PIRTP0C851 137 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 THEGLP0DJG4 465 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 ZFXP17010 805 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-208ENST00000550283 NFKB1P19838 968 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 HNF1BP35680 557 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 HSPA9P38646 679 aaKnown RBP11.26□□□□□ -0.61
RAB5B-208ENST00000550283 DPP6P42658 865 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 PFN3P60673 137 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 FZD2Q14332 565 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 GALNT3Q14435 633 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 CDKN3Q16667 212 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 TEX44Q53QW1 395 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 ODF2Q5BJF6 829 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 CRTC1Q6UUV9 634 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 ZNF662Q6ZS27 426 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 Q6ZSR6 202 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 KANSL1Q7Z3B3 1105 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 ADAT2Q7Z6V5 191 aaKnown RBP11.26□□□□□ -0.61
RAB5B-208ENST00000550283 PRUNE1Q86TP1 453 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 RNF10Q8N5U6 811 aaKnown RBP11.26□□□□□ -0.61
RAB5B-208ENST00000550283 MFSD2AQ8NA29 543 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 PTCD2Q8WV60 388 aaKnown RBP11.26□□□□□ -0.61
RAB5B-208ENST00000550283 TFB1MQ8WVM0 346 aaKnown RBP11.26□□□□□ -0.61
RAB5B-208ENST00000550283 ATG4AQ8WYN0 398 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 P3H4Q92791 437 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 COQ10AQ96MF6 247 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 MCCC1Q96RQ3 725 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-208ENST00000550283 TLR10Q9BXR5 811 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 TCEAL2Q9H3H9 227 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-208ENST00000550283 USP29Q9HBJ7 922 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 GLOD4Q9HC38 313 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 UCKL1Q9NWZ5 548 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 DMTF1Q9Y222 760 aa11.26□□□□□ -0.61
RAB5B-208ENST00000550283 A0A1B0GTQ1 180 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 SCAMP1O15126 338 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 RECQL5O94762 991 aaPredicted RBP11.25□□□□□ -0.61
RAB5B-208ENST00000550283 HEXIM1O94992 359 aaKnown RBP11.25□□□□□ -0.61
RAB5B-208ENST00000550283 TOP3BO95985 862 aaKnown RBP11.25□□□□□ -0.61
RAB5B-208ENST00000550283 SYPP08247 313 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 C1SP09871 688 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 AKT2P31751 481 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 CHRNA4P43681 627 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 NR2C2P49116 596 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 GDF10P55107 478 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 COPS2P61201 443 aa11.25□□□□□ -0.61
RAB5B-208ENST00000550283 EIF2B5Q13144 721 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms