RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	SOX13	Q9UN79	622 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	TCAF1	Q9Y4C2	921 aa		11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	MUC22	E2RYF6	1773 aa	Predicted RBP	11.68	□□□□□ -0.54
CNOT2-223	ENST00000550160	F5	P12259	2224 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160		A0A0J9YYE9	177 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	KRBA1	A5PL33	1030 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	FAM170B	A6NMN3	283 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	C16orf96	A6NNT2	1141 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	BANF1	O75531	89 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	TRBC1	P01850	177 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	CTSL	P07711	333 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	C5AR1	P21730	350 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	TARS	P26639	723 aa	Known RBP	11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	STX2	P32856	288 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	PSMD8	P48556	350 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	NEK3	P51956	506 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	CRADD	P78560	199 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	ELP6	Q0PNE2	266 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	FASTKD3	Q14CZ7	662 aa	Known RBP	11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	TAF1A	Q15573	450 aa	Predicted RBP	11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	CST6	Q15828	149 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	KYNU	Q16719	465 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	UGP2	Q16851	508 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	TJAP1	Q5JTD0	557 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	SPANXN3	Q5MJ09	141 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	PKN3	Q6P5Z2	889 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	HDX	Q7Z353	690 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	TTC7B	Q86TV6	843 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	MMAA	Q8IVH4	418 aa	Known RBP	11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	MPP5	Q8N3R9	675 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	PEX13	Q92968	403 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	SCRN2	Q96FV2	425 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	NSMCE3	Q96MG7	304 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	CCDC77	Q9BR77	488 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	KIFC1	Q9BW19	673 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	TXLNGY	Q9BZA5	131 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	OSBPL6	Q9BZF3	934 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	GPR63	Q9BZJ6	419 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	ACBD3	Q9H3P7	528 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	SEMA4A	Q9H3S1	761 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	TBC1D17	Q9HA65	648 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	LMAN1L	Q9HAT1	526 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	POLM	Q9NP87	494 aa	Predicted RBP	11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	NINJ2	Q9NZG7	142 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	MUTYH	Q9UIF7	546 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	SCML1	Q9UN30	329 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	PPIL1	Q9Y3C6	166 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	PKP3	Q9Y446	797 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	ZNF711	Q9Y462	761 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160	RPS6KL1	Q9Y6S9	549 aa		11.67	□□□□□ -0.54
CNOT2-223	ENST00000550160		A0A087WUV0	522 aa	Predicted RBP	11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	C1orf232	A0A0U1RR37	186 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	SHISA7	A6NL88	538 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	CHURC1-FNTB	B4DL54	471 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	RIPK2	O43353	540 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	USP1	O94782	785 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	PAPSS2	O95340	614 aa	Predicted RBP	11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	ACSL3	O95573	720 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	DNTT	P04053	509 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	IVL	P07476	585 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	ABHD2	P08910	425 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	CHRNB1	P11230	501 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	ZNF30	P17039	623 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	CTPS1	P17812	591 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	LPO	P22079	712 aa	Predicted RBP	11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	SLC8A1	P32418	973 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	HSD17B3	P37058	310 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	ABL2	P42684	1182 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	DGKE	P52429	567 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	SATB1	Q01826	763 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	ZBTB16	Q05516	673 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	IFFO1	Q0D2I5	559 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	ARHGEF7	Q14155	803 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	SKIDA1	Q1XH10	827 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	TTC31	Q49AM3	519 aa	Predicted RBP	11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	TSTD2	Q5T7W7	516 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	UNC5A	Q6ZN44	842 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	CAPN12	Q6ZSI9	719 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	C3orf62	Q6ZUJ4	267 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	PARS2	Q7L3T8	475 aa	Known RBP	11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	GSDMB	Q8TAX9	411 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	STYX	Q8WUJ0	223 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	RAB7B	Q96AH8	199 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	ZNF669	Q96BR6	464 aa	Predicted RBP	11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	LYSMD1	Q96S90	227 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	RUFY1	Q96T51	708 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	MFSD1	Q9H3U5	465 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	LRRC4C	Q9HCJ2	640 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	CHRAC1	Q9NRG0	131 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	RIMKLB	Q9ULI2	386 aa		11.66	□□□□□ -0.54
CNOT2-223	ENST00000550160	NEMP1	O14524	444 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	STX7	O15400	261 aa	Known RBP	11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	ADAM23	O75077	832 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	SLC4A1	P02730	911 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	ALPI	P09923	528 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	PIRT	P0C851	137 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	ACADM	P11310	421 aa		11.65	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms